Information for CAZyme ID: AWB65644.1
Basic Information
GenBank ID | AWB65644.1 |
Family | GH50 |
Sequence Length | 772 |
UniProt ID | A0A2S0VN50(100,100)![]() |
Average pLDDT? | 93.28 |
CAZy50 ID | 30285 |
CAZy50 Rep | Yes, AWB65644.1 |
Structure Cluster | SC_GH50_clus18 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2172099 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Alteromonadales |
Family | Alteromonadaceae |
Genus | Saccharobesus |
Species | Saccharobesus litoralis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKNLQTLTGL MLMTGLTACS LQQTTGSSAE STNSNTLLTL VDFESDHYKT MLTVTNGSSQ | 60 |
LVTDNGQGVS QGKQALQLDM AAKQNYLTAF TLAPQDNSTW DWSQYQNFSL AIDITNPLDE | 120 |
STHMYLEVAD SDGKLHRRSV NVGKNSSQTY HVELSGYDLG IESGMRANPD AFETNAKPFL | 180 |
YRWGATKEID LSAVKHIQFS AESLLSDRRF IIDNIRLVQN PKYDQAYLKG LVDEYGQAIT | 240 |
AKFPQKVSND QDLAARTKRE LSHLSDKLFS DRSQYGGWAQ GPKLEATGYF RTTKYKGKWA | 300 |
LVDPEGYLFF SNGIANVRMA NTSTMTGIDF DKALIPQRSK DDLTPEDSVG LNRITGKALS | 360 |
TRHVNSEMRN NMFSWLPDYH EPLAKHYGYR REAHIGAVES GETYSFYQAN LERKYGDNFM | 420 |
QTWKDITLKR MRNWGFTSFG NWIDPMFYHE NQLPYFANGW IIGNFKKVSS GADYWAPMPD | 480 |
PFDPLFAERV RATVKQVASE VQNSPWCIGV FVDNEKSWGR MGSIETQYGI VINTLGRATT | 540 |
DSPTKAHYSQ LLRQQYQTID KLNASWNSQI ASWQAFDQGV KVKDFTDSQV KDFSTLLSAY | 600 |
ADQYFKIVRQ ETKQQMPNHL YMGARFAPWG MTPEVLNAAV KYTDVMSFNY YREGLHPEQW | 660 |
AFLEEIDMPS VIGEFHFGAD DTGLYHPGAV LAQDQQDRAQ KYQGYLNSVI DNPYMVGAHW | 720 |
FQYVDSPTTG RAHDGENYNV GFVTSADIPY QPLVDKVKEV NGYLYQRKFG NQ | 772 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.28 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKNLQTLTGL MLMTGLTACS LQQTTGSSAE STNSNTLLTL VDFESDHYKT MLTVTNGSSQ | 60 |
LVTDNGQGVS QGKQALQLDM AAKQNYLTAF TLAPQDNSTW DWSQYQNFSL AIDITNPLDE | 120 |
STHMYLEVAD SDGKLHRRSV NVGKNSSQTY HVELSGYDLG IESGMRANPD AFETNAKPFL | 180 |
YRWGATKEID LSAVKHIQFS AESLLSDRRF IIDNIRLVQN PKYDQAYLKG LVDEYGQAIT | 240 |
AKFPQKVSND QDLAARTKRE LSHLSDKLFS DRSQYGGWAQ GPKLEATGYF RTTKYKGKWA | 300 |
LVDPEGYLFF SNGIANVRMA NTSTMTGIDF DKALIPQRSK DDLTPEDSVG LNRITGKALS | 360 |
TRHVNSEMRN NMFSWLPDYH EPLAKHYGYR REAHIGAVES GETYSFYQAN LERKYGDNFM | 420 |
QTWKDITLKR MRNWGFTSFG NWIDPMFYHE NQLPYFANGW IIGNFKKVSS GADYWAPMPD | 480 |
PFDPLFAERV RATVKQVASE VQNSPWCIGV FVDNEKSWGR MGSIETQYGI VINTLGRATT | 540 |
DSPTKAHYSQ LLRQQYQTID KLNASWNSQI ASWQAFDQGV KVKDFTDSQV KDFSTLLSAY | 600 |
ADQYFKIVRQ ETKQQMPNHL YMGARFAPWG MTPEVLNAAV KYTDVMSFNY YREGLHPEQW | 660 |
AFLEEIDMPS VIGEFHFGAD DTGLYHPGAV LAQDQQDRAQ KYQGYLNSVI DNPYMVGAHW | 720 |
FQYVDSPTTG RAHDGENYNV GFVTSADIPY QPLVDKVKEV NGYLYQRKFG NQ | 772 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.