CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AUS97926.1

Basic Information

GenBank IDAUS97926.1
FamilyGH2
Sequence Length853
UniProt IDA0A2K2FRY8(100,100)Download
Average pLDDT?94.07
CAZy50 ID22702
CAZy50 RepYes, AUS97926.1
Structure ClusterSC_GH2_clus103
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID84032
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium thermosuccinogenes

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKTLDLAGTW  RLRAEFIDVG  PERFAEVAGR  PKGKFSFIHG  VKRRFPAKQG  FIQAQVPCDV60
ITPLMENNLL  EEPLDKKNTD  DCLWICDYSW  WFLREFEVDK  ELLNCEEVRL  YIEILDYKAD120
IIINNMPVAS  HKNAFRPLDI  DVKRYLREGS  NQIIIRLTSG  FEDHYPNDSI  SYYCANGNGI180
ADQRVYLRKP  AYSMGWDWCK  PVPTCGIGRK  IELRGVSGAH  ITGFRADTVS  IHDNKADIEL240
YFEITNLSIC  SADDAVLWYE  ICDANGRVIC  ERKDLYLAGG  INFITEYKTI  EKAKLWWPNG300
YGLQNLYIAR  AGVICRGHEN  EMQPKTVGLR  TLVLRQDKLP  DGSREFRFIV  NGVPIFCKGG360
NWVPADSVYL  RIPLSTYRTL  VDEAAYMNSN  MLRIWGGGLY  EPDEFYDYCS  QKGILVMHDF420
MYACAYYPDH  LPWFVHEARL  EAEYQVKRLA  HHCCIAVWTG  NNEVHESYTD  WFDEHQQADY480
YFGSRLFNYI  FPEIVRNHAP  RVPYMPSSPF  FGDRANSLYA  GDTHVWNHMR  KDSEIGMKNA540
ADLYAFDRLA  AKVRFSSEYG  FHGPLVRSSV  ERYHCGEPVS  MDGEIWRHHG  EHHKKHEHIV600
ERIRVHLADE  AKLHDLDGYL  LYGGIVQGLM  YADMALALRR  FEHCSGCLIW  MYNDCWPETG660
WTPIDYYLTR  KISYYFLKRA  FEPRKLILRA  EQGTAVVTVI  NETPEDLKAE  LEYGFFTFKG720
DMQSIGLWSV  DMAAHSRMQF  EFPAKDMGFD  GAYYVRQIDG  DFFGVATSIR  GYYRDISVEN780
AGLKIEKMEQ  IGNELLVTVS  SKTYCPLVYL  RCPDDTVRFD  DNFFEMLPGQ  RKKVRVFDCV840
GDLEVQAVPI  DNR853

Predicted 3D structure by AlphaFold2 with pLDDT = 94.07 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MKTLDLAGTW  RLRAEFIDVG  PERFAEVAGR  PKGKFSFIHG  VKRRFPAKQG  FIQAQVPCDV60
ITPLMENNLL  EEPLDKKNTD  DCLWICDYSW  WFLREFEVDK  ELLNCEEVRL  YIEILDYKAD120
IIINNMPVAS  HKNAFRPLDI  DVKRYLREGS  NQIIIRLTSG  FEDHYPNDSI  SYYCANGNGI180
ADQRVYLRKP  AYSMGWDWCK  PVPTCGIGRK  IELRGVSGAH  ITGFRADTVS  IHDNKADIEL240
YFEITNLSIC  SADDAVLWYE  ICDANGRVIC  ERKDLYLAGG  INFITEYKTI  EKAKLWWPNG300
YGLQNLYIAR  AGVICRGHEN  EMQPKTVGLR  TLVLRQDKLP  DGSREFRFIV  NGVPIFCKGG360
NWVPADSVYL  RIPLSTYRTL  VDEAAYMNSN  MLRIWGGGLY  EPDEFYDYCS  QKGILVMHDF420
MYACAYYPDH  LPWFVHEARL  EAEYQVKRLA  HHCCIAVWTG  NNEVHESYTD  WFDEHQQADY480
YFGSRLFNYI  FPEIVRNHAP  RVPYMPSSPF  FGDRANSLYA  GDTHVWNHMR  KDSEIGMKNA540
ADLYAFDRLA  AKVRFSSEYG  FHGPLVRSSV  ERYHCGEPVS  MDGEIWRHHG  EHHKKHEHIV600
ERIRVHLADE  AKLHDLDGYL  LYGGIVQGLM  YADMALALRR  FEHCSGCLIW  MYNDCWPETG660
WTPIDYYLTR  KISYYFLKRA  FEPRKLILRA  EQGTAVVTVI  NETPEDLKAE  LEYGFFTFKG720
DMQSIGLWSV  DMAAHSRMQF  EFPAKDMGFD  GAYYVRQIDG  DFFGVATSIR  GYYRDISVEN780
AGLKIEKMEQ  IGNELLVTVS  SKTYCPLVYL  RCPDDTVRFD  DNFFEMLPGQ  RKKVRVFDCV840
GDLEVQAVPI  DNR853

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH2(3-705)

MKTLDLAGTW  RLRAEFIDVG  PERFAEVAGR  PKGKFSFIHG  VKRRFPAKQG  FIQAQVPCDV60
ITPLMENNLL  EEPLDKKNTD  DCLWICDYSW  WFLREFEVDK  ELLNCEEVRL  YIEILDYKAD120
IIINNMPVAS  HKNAFRPLDI  DVKRYLREGS  NQIIIRLTSG  FEDHYPNDSI  SYYCANGNGI180
ADQRVYLRKP  AYSMGWDWCK  PVPTCGIGRK  IELRGVSGAH  ITGFRADTVS  IHDNKADIEL240
YFEITNLSIC  SADDAVLWYE  ICDANGRVIC  ERKDLYLAGG  INFITEYKTI  EKAKLWWPNG300
YGLQNLYIAR  AGVICRGHEN  EMQPKTVGLR  TLVLRQDKLP  DGSREFRFIV  NGVPIFCKGG360
NWVPADSVYL  RIPLSTYRTL  VDEAAYMNSN  MLRIWGGGLY  EPDEFYDYCS  QKGILVMHDF420
MYACAYYPDH  LPWFVHEARL  EAEYQVKRLA  HHCCIAVWTG  NNEVHESYTD  WFDEHQQADY480
YFGSRLFNYI  FPEIVRNHAP  RVPYMPSSPF  FGDRANSLYA  GDTHVWNHMR  KDSEIGMKNA540
ADLYAFDRLA  AKVRFSSEYG  FHGPLVRSSV  ERYHCGEPVS  MDGEIWRHHG  EHHKKHEHIV600
ERIRVHLADE  AKLHDLDGYL  LYGGIVQGLM  YADMALALRR  FEHCSGCLIW  MYNDCWPETG660
WTPIDYYLTR  KISYYFLKRA  FEPRKLILRA  EQGTAVVTVI  NETPEDLKAE  LEYGFFTFKG720
DMQSIGLWSV  DMAAHSRMQF  EFPAKDMGFD  GAYYVRQIDG  DFFGVATSIR  GYYRDISVEN780
AGLKIEKMEQ  IGNELLVTVS  SKTYCPLVYL  RCPDDTVRFD  DNFFEMLPGQ  RKKVRVFDCV840
GDLEVQAVPI  DNR853

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help