Information for CAZyme ID: ATX70933.1
Basic Information
GenBank ID | ATX70933.1 |
Family | GH85 |
Sequence Length | 952 |
UniProt ID | A0A2K8KGW2(100,100)![]() |
Average pLDDT? | 86.02 |
CAZy50 ID | 16518 |
CAZy50 Rep | Yes, ATX70933.1 |
Structure Cluster | SC_GH85_clus54 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 2139 |
Kingdom | Bacteria |
Phylum | Mycoplasmatota |
Class | Mollicutes |
Order | Entomoplasmatales |
Family | Spiroplasmataceae |
Genus | Spiroplasma |
Species | Spiroplasma clarkii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKKLLVWLQI VAIVAPTISI VSACDIGTTS TRPYLLSLDD YNWAEDTGAG AEYNFTDQDK | 60 |
TTDQVNSDEV AIKTVANGPV DQVFDYDKFS TGYKTRRSIR KQGVTGVPIV TTFRPNGNTW | 120 |
SDYGVDSKSR KFEYFNSVLD WDKDNLDLKY NTAATDIRAR NYVAAKSTKR QLQGVYYNRF | 180 |
HDKGNSDSSI VGTNNPYSAL MTNYSYVNDF IGWAGFTNLG WLTPLSADVT DQLHKNGVNA | 240 |
IGLLYLSGWE DVSREKLKKL FELDSQGNFK IVDILINQAL TLNFDGWFIN DEANGGAPDG | 300 |
SVVKQSDIYE IIRQFNIKAA ALERKGGKTL TFNYYKNTNS INKEEPAYSQ TLAAVNGTTV | 360 |
GFGANAKNRT KFQLDFNRLF PGEEENFFTE RNNGDPTYPS RFYSMYYEGA NTPGIGNIDI | 420 |
RKYLYKVTNK FSEKKPELTY DYENHTPVSF SSFGSGAEND IARSSFIEFS KNAKTPFDTD | 480 |
WAWLKTQEIS NLYNSYMYAG YNGYLKSDAK GFEQAFENNK NKYNDEESYA AMRKNMHRDA | 540 |
SYGNAIALKD ILAIDPRVDF DQIKNETPPT DSNKQFFWDE NTGVYPFSYG YGNDFAEQTV | 600 |
LTDTKLNQYT NAEETTTAPN ITTSFSTGSG MYFVDRDSAG KLLSYASNYP WTNNRLADVM | 660 |
PTYQWDFWKT TQSDRTVTDN NTVDGVKYRS KITKAGQLNG YFDYNNPYKK GNSIAIGNGY | 720 |
DFNGAQGRIK PGIWEKNSAY NWNLMGTNLQ TSDYTLDFKV KAAKHDDIKS AGLAEVVKNT | 780 |
KVLVKTSSTE APKVIEPTSV TPVDGGWYNV SLNLSQAGLS VNDQNRLAKI GLQINTGDNT | 840 |
EFIYNVGELS LKPNTMSAPV VNSKIKRLSN EATIVRDENA SIRFNWETDN TSNIDYYEVF | 900 |
YKYDDKWYRV GQTNLTSYYL RDLVAGDALT LGIRIKYNSG ESSQMFTGTF KI | 952 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.02 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKKLLVWLQI VAIVAPTISI VSACDIGTTS TRPYLLSLDD YNWAEDTGAG AEYNFTDQDK | 60 |
TTDQVNSDEV AIKTVANGPV DQVFDYDKFS TGYKTRRSIR KQGVTGVPIV TTFRPNGNTW | 120 |
SDYGVDSKSR KFEYFNSVLD WDKDNLDLKY NTAATDIRAR NYVAAKSTKR QLQGVYYNRF | 180 |
HDKGNSDSSI VGTNNPYSAL MTNYSYVNDF IGWAGFTNLG WLTPLSADVT DQLHKNGVNA | 240 |
IGLLYLSGWE DVSREKLKKL FELDSQGNFK IVDILINQAL TLNFDGWFIN DEANGGAPDG | 300 |
SVVKQSDIYE IIRQFNIKAA ALERKGGKTL TFNYYKNTNS INKEEPAYSQ TLAAVNGTTV | 360 |
GFGANAKNRT KFQLDFNRLF PGEEENFFTE RNNGDPTYPS RFYSMYYEGA NTPGIGNIDI | 420 |
RKYLYKVTNK FSEKKPELTY DYENHTPVSF SSFGSGAEND IARSSFIEFS KNAKTPFDTD | 480 |
WAWLKTQEIS NLYNSYMYAG YNGYLKSDAK GFEQAFENNK NKYNDEESYA AMRKNMHRDA | 540 |
SYGNAIALKD ILAIDPRVDF DQIKNETPPT DSNKQFFWDE NTGVYPFSYG YGNDFAEQTV | 600 |
LTDTKLNQYT NAEETTTAPN ITTSFSTGSG MYFVDRDSAG KLLSYASNYP WTNNRLADVM | 660 |
PTYQWDFWKT TQSDRTVTDN NTVDGVKYRS KITKAGQLNG YFDYNNPYKK GNSIAIGNGY | 720 |
DFNGAQGRIK PGIWEKNSAY NWNLMGTNLQ TSDYTLDFKV KAAKHDDIKS AGLAEVVKNT | 780 |
KVLVKTSSTE APKVIEPTSV TPVDGGWYNV SLNLSQAGLS VNDQNRLAKI GLQINTGDNT | 840 |
EFIYNVGELS LKPNTMSAPV VNSKIKRLSN EATIVRDENA SIRFNWETDN TSNIDYYEVF | 900 |
YKYDDKWYRV GQTNLTSYYL RDLVAGDALT LGIRIKYNSG ESSQMFTGTF KI | 952 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.