Information for CAZyme ID: ATO84721.1
Basic Information
| GenBank ID | ATO84721.1 |
| Family | GH173 |
| Sequence Length | 620 |
| UniProt ID | G8S793(100,100) |
| Average pLDDT? | 82.39 |
| CAZy50 ID | 49627 |
| CAZy50 Rep | Yes, ATO84721.1 |
| Structure Cluster | SC_GH173_clus4 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 2033844 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micromonosporales |
| Family | Micromonosporaceae |
| Genus | Actinoplanes |
| Species | Actinoplanes sp. SE50 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRNRLLPLAL TALTLVAAGP PAPAGAARSP AEPVAGTWIG FGYNQDPQYA GGTGTPTPWD | 60 |
| PRAFQRMTER TTFIRPPIVR VMLNRDWFNP TGVAGRYEWA SVQMTNLYQV LTHYRSLGTR | 120 |
| VQLGLWGVQP SSAVNPYTAT ETATVQADLM RRLYVTDAYT NIVRYTGVNE PNVKNEAKNY | 180 |
| SYADWVTATT NLRAAFAAEN LPVTLLGGPD TAEATISGQD GDLGLESVTG GAAATGQNAV | 240 |
| WRADGLAGFD ATFYVSPDTG AADWKFYTSR DGSSWAQLDP ASLVQSAPVK TVATNPWYRY | 300 |
| EVRNGAPLAA GTDYLRITLP AHAGTERALA SLTMTTGAGG TVADPMNDWS HATSHSSGWT | 360 |
| HLQGAPTDDW WLEAAGSSLV SGLQTHFYAH ELDLADAGYP VQQLQEYPEA TLREAVRQVR | 420 |
| AAAPGVPVIL GETGMKAPKS TDGKDYAFTD EPEHGVRMAD LAVQEVRAGV DGAMAWCLDG | 480 |
| YAAAVQCGMW DHEGTTEATT ALRPWFYTWS LLCRYLPAGS TLYAPAQQPG LRLLQAQAPG | 540 |
| SGGWTFVLVN RGTTAVTVPM TAPTGKVTFH RYLYQAAANP PGPVDADGFP VPAGTFLGSF | 600 |
| DGGRPVTVPA DAVVLITSMS | 620 |
Predicted 3D structure by AlphaFold2 with pLDDT = 82.39 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MRNRLLPLAL TALTLVAAGP PAPAGAARSP AEPVAGTWIG FGYNQDPQYA GGTGTPTPWD | 60 |
| PRAFQRMTER TTFIRPPIVR VMLNRDWFNP TGVAGRYEWA SVQMTNLYQV LTHYRSLGTR | 120 |
| VQLGLWGVQP SSAVNPYTAT ETATVQADLM RRLYVTDAYT NIVRYTGVNE PNVKNEAKNY | 180 |
| SYADWVTATT NLRAAFAAEN LPVTLLGGPD TAEATISGQD GDLGLESVTG GAAATGQNAV | 240 |
| WRADGLAGFD ATFYVSPDTG AADWKFYTSR DGSSWAQLDP ASLVQSAPVK TVATNPWYRY | 300 |
| EVRNGAPLAA GTDYLRITLP AHAGTERALA SLTMTTGAGG TVADPMNDWS HATSHSSGWT | 360 |
| HLQGAPTDDW WLEAAGSSLV SGLQTHFYAH ELDLADAGYP VQQLQEYPEA TLREAVRQVR | 420 |
| AAAPGVPVIL GETGMKAPKS TDGKDYAFTD EPEHGVRMAD LAVQEVRAGV DGAMAWCLDG | 480 |
| YAAAVQCGMW DHEGTTEATT ALRPWFYTWS LLCRYLPAGS TLYAPAQQPG LRLLQAQAPG | 540 |
| SGGWTFVLVN RGTTAVTVPM TAPTGKVTFH RYLYQAAANP PGPVDADGFP VPAGTFLGSF | 600 |
| DGGRPVTVPA DAVVLITSMS | 620 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.