Information for CAZyme ID: ATH97466.1
Basic Information
GenBank ID | ATH97466.1 |
Family | GH32 |
Sequence Length | 422 |
UniProt ID | A0A2I1LIM6(96.9,100)![]() |
Average pLDDT? | 91.38 |
CAZy50 ID | 88491 |
CAZy50 Rep | Yes, ATH97466.1 |
Structure Cluster | SC_GH32_clus93 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1667168 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Micrococcales |
Family | Dermabacteraceae |
Genus | Dermabacter |
Species | Dermabacter jinjuensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTAQQASDPT SFFPQRHRVH ARGWINDPNG IHKNGDTWHV YFQWNPHSAR HDRIHWGHVV | 60 |
SRDLVHWEER PAALVPRKGE ADSAGCWSGV GLVDHGPGAA EGGTPTLVYS GVEETNPQFA | 120 |
SAIVARGNPD ESLFDRFTVA APAPDIEGLT GIRDPFVLEA EGHRFVIQGA GMKREDGSHD | 180 |
AVLLAWLADD LERWVYLGEV ASSADPGLRD MTRSTLWECP QLVRVDGRWV LIVGLWHGEN | 240 |
EAEGKPVLQG SGYALGSLEV QFDGDTPCGL RFHDVTSQGL VDQGPDFYAP QAYVDGDRVL | 300 |
LWGWSWENAS RTQEQTDAQG WAGCLTLPRE LHLNGNVLTS HFPEEILAHA QEAGVHEFGS | 360 |
DGCRISIVDP SGNERDVARL EGPGAVAVDR SIIEVLPENG TPKTLRVYGE VRIHAHAAAR | 420 |
AS | 422 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.38 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MTAQQASDPT SFFPQRHRVH ARGWINDPNG IHKNGDTWHV YFQWNPHSAR HDRIHWGHVV | 60 |
SRDLVHWEER PAALVPRKGE ADSAGCWSGV GLVDHGPGAA EGGTPTLVYS GVEETNPQFA | 120 |
SAIVARGNPD ESLFDRFTVA APAPDIEGLT GIRDPFVLEA EGHRFVIQGA GMKREDGSHD | 180 |
AVLLAWLADD LERWVYLGEV ASSADPGLRD MTRSTLWECP QLVRVDGRWV LIVGLWHGEN | 240 |
EAEGKPVLQG SGYALGSLEV QFDGDTPCGL RFHDVTSQGL VDQGPDFYAP QAYVDGDRVL | 300 |
LWGWSWENAS RTQEQTDAQG WAGCLTLPRE LHLNGNVLTS HFPEEILAHA QEAGVHEFGS | 360 |
DGCRISIVDP SGNERDVARL EGPGAVAVDR SIIEVLPENG TPKTLRVYGE VRIHAHAAAR | 420 |
AS | 422 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.