Information for CAZyme ID: ARN57748.1
Basic Information
| GenBank ID | ARN57748.1 |
| Family | GH2 |
| Sequence Length | 1031 |
| UniProt ID | A0A1W6LPM1(100,100) |
| Average pLDDT? | 94.36 |
| CAZy50 ID | 12988 |
| CAZy50 Rep | Yes, ARN57748.1 |
| Structure Cluster | SC_GH2_clus84 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1941349 |
| Kingdom | Bacteria |
| Phylum | Planctomycetota |
| Class | Phycisphaerae |
| Order | Sedimentisphaerales |
| Family | Sedimentisphaeraceae |
| Genus | Sedimentisphaera |
| Species | Sedimentisphaera salicampi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRFKISLITV LFVSFLCLAQ NDWENQNVIS INKLAPRAGI VPFTSLQDAQ ELEEEKSERY | 60 |
| LSLNGVWKFK LSETFESSPK DFFKPEFDVG GWDEIEVPSC WQMQGFGKPI YTNVRYPFEK | 120 |
| KPPFIEPRYD NTNTVGSYRR EFTLPESWTG KRIVVHFGGV NSAFYLWVNG EKVGYSQGSW | 180 |
| TPAEFDITDY VQAGGNTISA KVFRWSDGSY LEDQDGWRMS GIFRKVYLIA QNRLSITDMN | 240 |
| IVTDLDKLYK DAVVKASFTV LNAGEKASSP AEIKAQITGE KGEAAAEAKV AVPAIKPGER | 300 |
| GEVKTYIRVE APKKWTAETP NLYSFTASLN SQQDKEFAGL KIGFREIEIK DQQVFVNGEP | 360 |
| VIFKGVNRVE HSETGGKKVS YEQLKKEILL MKRNNINVVR TAHYPANEEL CELCDEYGIY | 420 |
| VVDEANLESH EYGFHNNKLA LDPSWEEAHL DRIRSLIYRD RNHPSVIFWS HGNEAGTNRN | 480 |
| LIEMDKLARR LDPSRPTHYH IEAKQKVFDT LGGPRYRSLE ELKKIALNGD SRPFLLNEFA | 540 |
| HAMGNAMGSL TEYTEMFEKH KRLIGGCIWD WIDQGIAREK NGREYWAYGG DFGDKPNSGN | 600 |
| FCINGVILPD LSVTGKLMEV KKAFQPIIFE GVNLGDKLIR IENRYDFTNL SELDFWWRIL | 660 |
| EDGRQIQAGI LEGVEAEPNT KTSPLKVGFD SSGFKQGSEY VLELSARTAK DMNWADKGFE | 720 |
| IAFGQFVVQR SDFKPRLGKQ GELECSALDK EFDVSGEGFT ASFDIAEGIL SSLSYEGAEV | 780 |
| IQTGPKGHFW RAPTDNDNKG FKKQWREAGL DKLRRTVLDV DYVPSDKMAV VTVKAMYSED | 840 |
| LQIKEPIGWE TQEQYTVYPC GSIQVDMQMR PFGKMPENLP RLGSLMIAPK GFDNFQWYGK | 900 |
| GPMHSYPDRK EGQKLGIYSG SVSEQFVPYP RPQEFGNKSL VRWFTLKNDA GQGFKVAGRQ | 960 |
| ALNVTVSHFS DEDLTSASHL YELEKQDRCF VNVDYANAPV GNQSCGNVLP LEKYRLKPQS | 1020 |
| VDYGFVIQPC E | 1031 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.36 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MRFKISLITV LFVSFLCLAQ NDWENQNVIS INKLAPRAGI VPFTSLQDAQ ELEEEKSERY | 60 |
| LSLNGVWKFK LSETFESSPK DFFKPEFDVG GWDEIEVPSC WQMQGFGKPI YTNVRYPFEK | 120 |
| KPPFIEPRYD NTNTVGSYRR EFTLPESWTG KRIVVHFGGV NSAFYLWVNG EKVGYSQGSW | 180 |
| TPAEFDITDY VQAGGNTISA KVFRWSDGSY LEDQDGWRMS GIFRKVYLIA QNRLSITDMN | 240 |
| IVTDLDKLYK DAVVKASFTV LNAGEKASSP AEIKAQITGE KGEAAAEAKV AVPAIKPGER | 300 |
| GEVKTYIRVE APKKWTAETP NLYSFTASLN SQQDKEFAGL KIGFREIEIK DQQVFVNGEP | 360 |
| VIFKGVNRVE HSETGGKKVS YEQLKKEILL MKRNNINVVR TAHYPANEEL CELCDEYGIY | 420 |
| VVDEANLESH EYGFHNNKLA LDPSWEEAHL DRIRSLIYRD RNHPSVIFWS HGNEAGTNRN | 480 |
| LIEMDKLARR LDPSRPTHYH IEAKQKVFDT LGGPRYRSLE ELKKIALNGD SRPFLLNEFA | 540 |
| HAMGNAMGSL TEYTEMFEKH KRLIGGCIWD WIDQGIAREK NGREYWAYGG DFGDKPNSGN | 600 |
| FCINGVILPD LSVTGKLMEV KKAFQPIIFE GVNLGDKLIR IENRYDFTNL SELDFWWRIL | 660 |
| EDGRQIQAGI LEGVEAEPNT KTSPLKVGFD SSGFKQGSEY VLELSARTAK DMNWADKGFE | 720 |
| IAFGQFVVQR SDFKPRLGKQ GELECSALDK EFDVSGEGFT ASFDIAEGIL SSLSYEGAEV | 780 |
| IQTGPKGHFW RAPTDNDNKG FKKQWREAGL DKLRRTVLDV DYVPSDKMAV VTVKAMYSED | 840 |
| LQIKEPIGWE TQEQYTVYPC GSIQVDMQMR PFGKMPENLP RLGSLMIAPK GFDNFQWYGK | 900 |
| GPMHSYPDRK EGQKLGIYSG SVSEQFVPYP RPQEFGNKSL VRWFTLKNDA GQGFKVAGRQ | 960 |
| ALNVTVSHFS DEDLTSASHL YELEKQDRCF VNVDYANAPV GNQSCGNVLP LEKYRLKPQS | 1020 |
| VDYGFVIQPC E | 1031 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.