Information for CAZyme ID: ARJ05455.1
Basic Information
GenBank ID | ARJ05455.1 |
Family | CBM20, GH15 |
Sequence Length | 810 |
UniProt ID | A0A1X9LJS4(100,100)![]() |
Average pLDDT? | 93.56 |
CAZy50 ID | 26296 |
CAZy50 Rep | Yes, ARJ05455.1 |
Structure Cluster | SC_CBM20_clus20, SC_GH15_clus10 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1619308 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Micrococcales |
Family | Microbacteriaceae |
Genus | Cnuibacter |
Species | Cnuibacter physcomitrellae |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MHRRILSSAL AVGIVAAGLG FVPIPSATAA PLVPLAPGAP GVAATWTSGD KHGLGTAVSD | 60 |
ASKVWYTLGS GTTTEVFYPT VDRPQVQDLQ FVVTDGVSRT YVERDDSVHE TTLVDPEALE | 120 |
YRQTDTAKDG SFRITKTYVT SPGRQTLLID TRFEQLSGTT PLHLYVLFNP STGGDGNANR | 180 |
GNTLDGMLIS QGGPTSAALA SSLGFGDTTT GYSGTASDPY RQLTADHRLS TLYGGAATDG | 240 |
NIVQSAEITV GRDTRFTLAL GFGSTLNDAQ GAASNALGDG FAATESAYVA GWRGYLSSLS | 300 |
PAPSSVAGTS LETQYDVAVM TLRAHEDKTV RGAFVASLSV PWGQAVPGTM ANPGYHAIWA | 360 |
RDLYQVATAL LAAGDRAGAA RALDYMLNVQ QRADGSMPHN TMVDGSDTGL TGIQLDEVAF | 420 |
PAVLASMLGR SDSATWAKLK LSADYLVSHG PSTPQERWEE QAGFSPSTIA AEIAGLVASA | 480 |
DIAVKNGDRA SATRYLDTAD LWRASLESWT VTHTGSIGTP HYERIDPIGT PDAGTTVCDT | 540 |
NGAGCTDARD LVDGGFLELV RLGIRSADDP TIAASVAVVD AQLRVDTPSG AMWRRYNRDG | 600 |
YGEHADGSPF NGTAGGIGRP WPVLAGERGQ YELANGRDAM PYLRSMAATA NDAYMIPEQV | 660 |
WDTADTGRFT AGEATDSAAP LAWAMAQYVR LAQSISAGRN VDTPAVVAAR YATGVEATFR | 720 |
ANATTTWGES LFVVGSIPAL GSWDTSKAIR LSSASYPDWA VEVALPAGVS LEYKYIRKSA | 780 |
DGTVTWESGA NRTITLPGSG TPVYRDTWRR | 810 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.56 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MHRRILSSAL AVGIVAAGLG FVPIPSATAA PLVPLAPGAP GVAATWTSGD KHGLGTAVSD | 60 |
ASKVWYTLGS GTTTEVFYPT VDRPQVQDLQ FVVTDGVSRT YVERDDSVHE TTLVDPEALE | 120 |
YRQTDTAKDG SFRITKTYVT SPGRQTLLID TRFEQLSGTT PLHLYVLFNP STGGDGNANR | 180 |
GNTLDGMLIS QGGPTSAALA SSLGFGDTTT GYSGTASDPY RQLTADHRLS TLYGGAATDG | 240 |
NIVQSAEITV GRDTRFTLAL GFGSTLNDAQ GAASNALGDG FAATESAYVA GWRGYLSSLS | 300 |
PAPSSVAGTS LETQYDVAVM TLRAHEDKTV RGAFVASLSV PWGQAVPGTM ANPGYHAIWA | 360 |
RDLYQVATAL LAAGDRAGAA RALDYMLNVQ QRADGSMPHN TMVDGSDTGL TGIQLDEVAF | 420 |
PAVLASMLGR SDSATWAKLK LSADYLVSHG PSTPQERWEE QAGFSPSTIA AEIAGLVASA | 480 |
DIAVKNGDRA SATRYLDTAD LWRASLESWT VTHTGSIGTP HYERIDPIGT PDAGTTVCDT | 540 |
NGAGCTDARD LVDGGFLELV RLGIRSADDP TIAASVAVVD AQLRVDTPSG AMWRRYNRDG | 600 |
YGEHADGSPF NGTAGGIGRP WPVLAGERGQ YELANGRDAM PYLRSMAATA NDAYMIPEQV | 660 |
WDTADTGRFT AGEATDSAAP LAWAMAQYVR LAQSISAGRN VDTPAVVAAR YATGVEATFR | 720 |
ANATTTWGES LFVVGSIPAL GSWDTSKAIR LSSASYPDWA VEVALPAGVS LEYKYIRKSA | 780 |
DGTVTWESGA NRTITLPGSG TPVYRDTWRR | 810 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.