Information for CAZyme ID: AQV00496.1
Basic Information
GenBank ID | AQV00496.1 |
Family | PL29 |
Sequence Length | 613 |
UniProt ID | S7TW91(100,100)![]() |
Average pLDDT? | 88.77 |
CAZy50 ID | 50586 |
CAZy50 Rep | Yes, AQV00496.1 |
Structure Cluster | SC_PL29_clus5 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 897 |
Kingdom | Bacteria |
Phylum | Thermodesulfobacteriota |
Class | Desulfobacteria |
Order | Desulfobacterales |
Family | Desulfococcaceae |
Genus | Desulfococcus |
Species | Desulfococcus multivorans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTSPRLTVQK PCAIIVFLIV VMAGSLSGSD PAPEDSTSGK PVMDKAAGHA WIPADWTAYQ | 60 |
RIGASGSGLP DFSRAGYAMG DRPIPHVSGP VFDVTEQRFG AVPGDDRDDT AAIQAAIDTA | 120 |
GAAGGGVVFL PRGRFDIRQT GNAPYLRITR DQVVLRGQGD GTDGTVLFLG SPGPAGTVRR | 180 |
LGSVPALKEP RSGAAVAVIG PENREFLARY ISDLRRGERQ VAVSDTSRLS VGQSVVVEFE | 240 |
DPLIDTRNPH PKKADLPVQL THPFRLTADQ TDTFGKTARR LTWIVRIAQI VDAHTVRLTN | 300 |
PARFDQWLRY QPRIYAFRGV SGVGIENLRI ESRWPGNYRH HKPHVGTDGA VIRTAREQDY | 360 |
LWNGLWMSYA LDGWVRNVTF KDLTQGIIIS HSTNLSVQDV RFDGLDAHAG ITIGRSNDVL | 420 |
VSGADFFARM VHPVTLTMMA SGNVVTDCEI HYDGRDDETA TDAVIDFHGI FPFENLFDCL | 480 |
RGFYVCPGGD MSVLPHAGVR NVFWNIEAPR QMRCYGQNTD GEFVCTYAYQ GTSSGTPRTM | 540 |
HEHLPQAFFI GIRRSGGNPI TIGGSILDRK NEWLSVEGLN RPGIAIPSLY EAQRAGFSRE | 600 |
RREMDPVSEA RRN | 613 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.77 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MTSPRLTVQK PCAIIVFLIV VMAGSLSGSD PAPEDSTSGK PVMDKAAGHA WIPADWTAYQ | 60 |
RIGASGSGLP DFSRAGYAMG DRPIPHVSGP VFDVTEQRFG AVPGDDRDDT AAIQAAIDTA | 120 |
GAAGGGVVFL PRGRFDIRQT GNAPYLRITR DQVVLRGQGD GTDGTVLFLG SPGPAGTVRR | 180 |
LGSVPALKEP RSGAAVAVIG PENREFLARY ISDLRRGERQ VAVSDTSRLS VGQSVVVEFE | 240 |
DPLIDTRNPH PKKADLPVQL THPFRLTADQ TDTFGKTARR LTWIVRIAQI VDAHTVRLTN | 300 |
PARFDQWLRY QPRIYAFRGV SGVGIENLRI ESRWPGNYRH HKPHVGTDGA VIRTAREQDY | 360 |
LWNGLWMSYA LDGWVRNVTF KDLTQGIIIS HSTNLSVQDV RFDGLDAHAG ITIGRSNDVL | 420 |
VSGADFFARM VHPVTLTMMA SGNVVTDCEI HYDGRDDETA TDAVIDFHGI FPFENLFDCL | 480 |
RGFYVCPGGD MSVLPHAGVR NVFWNIEAPR QMRCYGQNTD GEFVCTYAYQ GTSSGTPRTM | 540 |
HEHLPQAFFI GIRRSGGNPI TIGGSILDRK NEWLSVEGLN RPGIAIPSLY EAQRAGFSRE | 600 |
RREMDPVSEA RRN | 613 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.