Information for CAZyme ID: AQR97380.1
Basic Information
GenBank ID | AQR97380.1 |
Family | GH43_10 |
Sequence Length | 541 |
UniProt ID | M1N5K0(99.3,100)![]() |
Average pLDDT? | 91.35 |
CAZy50 ID | 60958 |
CAZy50 Rep | Yes, AQR97380.1 |
Structure Cluster | SC_GH43_clus6 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 36745 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Eubacteriales |
Family | Clostridiaceae |
Genus | Clostridium |
Species | Clostridium saccharoperbutylacetonicum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLKNKLYKKR NYLNKIISMS VLSFVLLASP VLPANAYTSD LGNGTYQNPV MYADYPDNSV | 60 |
IKVGSTYYMG CSSISYMPGL PILKSQDLVN WEICSYAYDR IDVGMSGIDK AHADAYNLVG | 120 |
GKNVYSKGCW APSLKYNNGK FYATFSSLDL GKTFVCTRNA PMDFGGWDFT EIKGIGYAHD | 180 |
ADLFFDTDGR VYLVNGGCTI TELNTDCKSV KAGGINKKIF DGGSTHDGNR IFKKNGYYYI | 240 |
LSTPVKDGGG YQRIEKAWRS KTLTGTYEQK VILDDGANHQ VCVVEDGSYN WAALFEDKGA | 300 |
VGRIPKIAPV TWINDWPMIG VNGSGKVPAT YNKPASGNGI KSPDTSDDFT KATAISSQWQ | 360 |
WNHNPDNSKW SLSEHSGWLR LKTSYAANLL EARNTLAQRI QGPKSSGWVK LDATNIKPGQ | 420 |
ISGLSAFHSK YGYIAVRNDN GTKKLVQYNV DGTETSINLD NNTVYLKVDA DCDTQIAKFY | 480 |
YSYDANSWTK LGNNLKMDFF YKLWFIGYRF ALFNYTTGSD TSGYADFDYF KFSPTATGVG | 540 |
K | 541 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.35 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MLKNKLYKKR NYLNKIISMS VLSFVLLASP VLPANAYTSD LGNGTYQNPV MYADYPDNSV | 60 |
IKVGSTYYMG CSSISYMPGL PILKSQDLVN WEICSYAYDR IDVGMSGIDK AHADAYNLVG | 120 |
GKNVYSKGCW APSLKYNNGK FYATFSSLDL GKTFVCTRNA PMDFGGWDFT EIKGIGYAHD | 180 |
ADLFFDTDGR VYLVNGGCTI TELNTDCKSV KAGGINKKIF DGGSTHDGNR IFKKNGYYYI | 240 |
LSTPVKDGGG YQRIEKAWRS KTLTGTYEQK VILDDGANHQ VCVVEDGSYN WAALFEDKGA | 300 |
VGRIPKIAPV TWINDWPMIG VNGSGKVPAT YNKPASGNGI KSPDTSDDFT KATAISSQWQ | 360 |
WNHNPDNSKW SLSEHSGWLR LKTSYAANLL EARNTLAQRI QGPKSSGWVK LDATNIKPGQ | 420 |
ISGLSAFHSK YGYIAVRNDN GTKKLVQYNV DGTETSINLD NNTVYLKVDA DCDTQIAKFY | 480 |
YSYDANSWTK LGNNLKMDFF YKLWFIGYRF ALFNYTTGSD TSGYADFDYF KFSPTATGVG | 540 |
K | 541 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.