Information for CAZyme ID: APF21221.1
Basic Information
GenBank ID | APF21221.1 |
Family | GH2 |
Sequence Length | 943 |
UniProt ID | APF21221.1(MOD)![]() |
Average pLDDT? | 82.48 |
CAZy50 ID | 16961 |
CAZy50 Rep | Yes, APF21221.1 |
Structure Cluster | SC_GH2_clus103 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1492 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Eubacteriales |
Family | Clostridiaceae |
Genus | Clostridium |
Species | Clostridium butyricum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPDIYDIQRE KITKKCFDAI LKEDISFLPQ KFNSDYYKCL SDVSEKIINI FNNSSNAVQT | 60 |
NTINLNNGWD FKKYGDTSTV KINLPHQYDN PRDRSSVLKG KTIYSKNLFI SDINKDSFKY | 120 |
YLQINSASFK SEIFVNDISI LTHNGSYENF FADVTSNITS GTNTIRIEID NSNTGKNIIP | 180 |
LEADFSFVNG IFRDVNLIKL SDVYYSFDVY GSTRTMIETS NITVDSADLK VKTVIKNISG | 240 |
KNKNLKVVYS IFCNKKRIDT HSDSFEMIDS EIQVEQKFTI LNPEIWDGLK KGNLYNIQIC | 300 |
LYDSEKHVDT INTSTGFRTV SSNKDGFILN GKTYPLRGIN RHAENELNGF AITKADHDTD | 360 |
FEMIKELGVN AIRLAHYPQD RYFIDKCNEY GIVIYIEIPW VNLYPSTDIN DDLSNNIRFQ | 420 |
FKEMIKEYYN YPCICFWGMH NELTNDNNSS GTKLINYTLC KQLNNELYTY AKNNGGNRLV | 480 |
GYATIDKTTH EKEAGLNGDY YGTNVYFGWY NTDKIKNISE YLDLKHATTN DLIIFTEYGA | 540 |
GSNAMQFNLD IETLNWGGIS KDSNFSANGN YHPQEYQCLI HEGYLKSFLD RNYINTFAWV | 600 |
FSDFAVSFRN EGSQKALNDK GFVTRDRKIK KDVFYLYKAF LNKNDKFVHI NQKDFNIREN | 660 |
KNNTTNLTVY SNCDFVTLIK DNKIIDKQIA DINLGIKFTF KDVYLEIGNN DFTVCGYING | 720 |
IKEAEDKIEV KRKSCIVNKT VEIGMGNTTN GNITYIKNKV DNTIIGMGNK LDFETPYIKI | 780 |
NSNSKTEGYI LLNNLNLIST GWSMYINGAF YPDPNSNTKR IFSDSNNEIL EFYRINNDVN | 840 |
TSTNEYKISY HGVDLRLTSE ATTIIEKREL LKLVITFDGK SLKVYINGVL NASKEVILIS | 900 |
GEYFKINNLM FGNRYDLSRS YNLKFSTLQF YDGALTQEEI NNL | 943 |
Predicted 3D structure by AlphaFold2 with pLDDT = 82.48 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MPDIYDIQRE KITKKCFDAI LKEDISFLPQ KFNSDYYKCL SDVSEKIINI FNNSSNAVQT | 60 |
NTINLNNGWD FKKYGDTSTV KINLPHQYDN PRDRSSVLKG KTIYSKNLFI SDINKDSFKY | 120 |
YLQINSASFK SEIFVNDISI LTHNGSYENF FADVTSNITS GTNTIRIEID NSNTGKNIIP | 180 |
LEADFSFVNG IFRDVNLIKL SDVYYSFDVY GSTRTMIETS NITVDSADLK VKTVIKNISG | 240 |
KNKNLKVVYS IFCNKKRIDT HSDSFEMIDS EIQVEQKFTI LNPEIWDGLK KGNLYNIQIC | 300 |
LYDSEKHVDT INTSTGFRTV SSNKDGFILN GKTYPLRGIN RHAENELNGF AITKADHDTD | 360 |
FEMIKELGVN AIRLAHYPQD RYFIDKCNEY GIVIYIEIPW VNLYPSTDIN DDLSNNIRFQ | 420 |
FKEMIKEYYN YPCICFWGMH NELTNDNNSS GTKLINYTLC KQLNNELYTY AKNNGGNRLV | 480 |
GYATIDKTTH EKEAGLNGDY YGTNVYFGWY NTDKIKNISE YLDLKHATTN DLIIFTEYGA | 540 |
GSNAMQFNLD IETLNWGGIS KDSNFSANGN YHPQEYQCLI HEGYLKSFLD RNYINTFAWV | 600 |
FSDFAVSFRN EGSQKALNDK GFVTRDRKIK KDVFYLYKAF LNKNDKFVHI NQKDFNIREN | 660 |
KNNTTNLTVY SNCDFVTLIK DNKIIDKQIA DINLGIKFTF KDVYLEIGNN DFTVCGYING | 720 |
IKEAEDKIEV KRKSCIVNKT VEIGMGNTTN GNITYIKNKV DNTIIGMGNK LDFETPYIKI | 780 |
NSNSKTEGYI LLNNLNLIST GWSMYINGAF YPDPNSNTKR IFSDSNNEIL EFYRINNDVN | 840 |
TSTNEYKISY HGVDLRLTSE ATTIIEKREL LKLVITFDGK SLKVYINGVL NASKEVILIS | 900 |
GEYFKINNLM FGNRYDLSRS YNLKFSTLQF YDGALTQEEI NNL | 943 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.