Information for CAZyme ID: AOR25445.1
Basic Information
GenBank ID | AOR25445.1 |
Family | GH50 |
Sequence Length | 671 |
UniProt ID | A0A1D7XQ45(100,100)![]() |
Average pLDDT? | 90.50 |
CAZy50 ID | 42291 |
CAZy50 Rep | Yes, AOR25445.1 |
Structure Cluster | SC_GH50_clus18 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1336795 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Flavobacteriia |
Order | Flavobacteriales |
Family | Flavobacteriaceae |
Genus | Formosa |
Species | Formosa sp. Hel3_A1_48 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MFSIGAFNFN LFAQVYQSCD ENQIIRIVND KISERNYEFS WDFKDCPLDF SSHRFIGFNI | 60 |
ENNSSSKIIL DISHDPKPHL ENSARFIIAP NQFKTCEMMI TRQKPNQEDT WKSHFEKVRG | 120 |
YPGGYVTHWA APSSSKIEKL FVKISLSKPL EEGDFIGFNH PFGIGELEYD SNTLSKLSYP | 180 |
ILDKMGQFNA EKWRGKLHSI DTLEFLGNQD YKDFHGISFN SNLSKYGGWK NGPKQEAKGF | 240 |
FYTKKFDGKW WFVDPDGYLF WSLGITGIGG GSATKTTSRE VLFSDLSLER LSVKKYQDSM | 300 |
TLAASYHKRQ AKEYLIFKPD KINFYYLNLK RKYGENWIQK HQDVTAGRLK NWGVNTYGAW | 360 |
SKKSDFIEHP YTIIIHPKLQ GIGKIDKLPD PFSSEFSSAL KKSLQRIAHK NSDPWLLGVF | 420 |
VNNEIHWEHK FSLMDEILSL KNKKPARKAF EKFLKKKYGS INSLNSVWAS NFTSFNNISG | 480 |
DNKTMFSSKF MADLELFFSY FADTYYNIVS TEFKKIFPNH LYLGSRLYGK SKFNKNLHEI | 540 |
AAQYCDVVSF NIYDYGVKDF KLLSKIDKPM LIGEFHFGTA SHGVWGSGLR NASSLENQAN | 600 |
LYMQYIEEAC QHTQFIGAHW FQWSDQPTTG RSDGENFRIG VVSITDQPYS ELVEAIKKVS | 660 |
KTLYVKRKNK L | 671 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.50 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MFSIGAFNFN LFAQVYQSCD ENQIIRIVND KISERNYEFS WDFKDCPLDF SSHRFIGFNI | 60 |
ENNSSSKIIL DISHDPKPHL ENSARFIIAP NQFKTCEMMI TRQKPNQEDT WKSHFEKVRG | 120 |
YPGGYVTHWA APSSSKIEKL FVKISLSKPL EEGDFIGFNH PFGIGELEYD SNTLSKLSYP | 180 |
ILDKMGQFNA EKWRGKLHSI DTLEFLGNQD YKDFHGISFN SNLSKYGGWK NGPKQEAKGF | 240 |
FYTKKFDGKW WFVDPDGYLF WSLGITGIGG GSATKTTSRE VLFSDLSLER LSVKKYQDSM | 300 |
TLAASYHKRQ AKEYLIFKPD KINFYYLNLK RKYGENWIQK HQDVTAGRLK NWGVNTYGAW | 360 |
SKKSDFIEHP YTIIIHPKLQ GIGKIDKLPD PFSSEFSSAL KKSLQRIAHK NSDPWLLGVF | 420 |
VNNEIHWEHK FSLMDEILSL KNKKPARKAF EKFLKKKYGS INSLNSVWAS NFTSFNNISG | 480 |
DNKTMFSSKF MADLELFFSY FADTYYNIVS TEFKKIFPNH LYLGSRLYGK SKFNKNLHEI | 540 |
AAQYCDVVSF NIYDYGVKDF KLLSKIDKPM LIGEFHFGTA SHGVWGSGLR NASSLENQAN | 600 |
LYMQYIEEAC QHTQFIGAHW FQWSDQPTTG RSDGENFRIG VVSITDQPYS ELVEAIKKVS | 660 |
KTLYVKRKNK L | 671 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.