Information for CAZyme ID: ANV77642.1
Basic Information
| GenBank ID | ANV77642.1 |
| Family | CBM13, CBM6, CBM62, GH5_34 |
| Sequence Length | 948 |
| UniProt ID | A3DHG6(99.9,100) |
| Average pLDDT? | 92.45 |
| CAZy50 ID | 16722 |
| CAZy50 Rep | Yes, ANV77642.1 |
| Structure Cluster | SC_CBM13_clus30, SC_CBM13_clus40, SC_CBM62_clus13, SC_CBM62_clus5, SC_CBM6_clus32, SC_CBM6_clus37, SC_GH5_clus72 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 572545 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Acetivibrio |
| Species | Acetivibrio thermocellus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 92.45 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.