Information for CAZyme ID: ANU65206.1
Basic Information
| GenBank ID | ANU65206.1 |
| Family | GT2, GT4 |
| Sequence Length | 789 |
| UniProt ID | A0A1C7HD54(100,100) |
| Average pLDDT? | 85.68 |
| CAZy50 ID | 28464 |
| CAZy50 Rep | Yes, ANU65206.1 |
| Structure Cluster | SC_GT2_clus188, SC_GT4_clus678 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1834205 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | |
| Genus | |
| Species | Burkholderiales bacterium YL45 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MDISVIVPVH NSEIYLEACL KTLHEQTHQA AEFIVIDDGS DDKSGAICDA FAAVDKRFVV | 60 |
| IHQKPAGTLV TRKRAFALAT GKWCICLDAD DKLPFNRVLE IEVKLANHHD VDILRFDMEC | 120 |
| FGATPEKIKN YLNFRKEWQG SIHSPYLILD AIYNKAQIGW GMADKIYRTA TVHKTLPFLE | 180 |
| EPFLCCGTDC YQLFLISYFS STFKSIKTEP LYSYRIGSGI STSETNLDKF KEQAKILFIP | 240 |
| NYLRDFLTKE RQLSKYEAML SALSFRLIDA TISRFDLVQY PDSNSAFDLL LLNPSLIKEV | 300 |
| IEQLIRRYQT NQLELAEKIS ESRIFEGKPK KIKRVGIFYH RYFNGGTEKV IFHQIPLLIE | 360 |
| NGFEIFLITE IIDKKQEYFL PSEVKRICLP KEFQNGRAQG LFRALQHNKI DLIIYHAPCS | 420 |
| PTLFFDNLVV RSCGSAFIVT CHNFAPSTIS LFSPHWGKYS SYFKTVDALI TLTSVERDLF | 480 |
| SAYEIPSFLI PNPLFPPICA KGASDLEPRP SSFDKNKKHI IWIGRLENIQ KNYIEAMEIF | 540 |
| KNICSTLPDV TCHIIGKGET PLEEKYVRQF ISDNDLEQRI IYEGFLTSAD KCFKYADIHL | 600 |
| MTSTFECFPM VLSEAMSYGV PTVLYEMPYL ELIKNNKGCI SVPRHHVEKA SQEILRLLTN | 660 |
| ETERHDCSQK TSEAYRSYLA SNLSHIQGLM SLIHKIEEAR VAKPQRNDSF IELWESFVSF | 720 |
| QTETNYQPKV NIKEIQISAY DQKKISRYDN CLSFFLNFAP KDSYRYSFSK RIAKWLYSII | 780 |
| KDKNIKRQD | 789 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.68 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MDISVIVPVH NSEIYLEACL KTLHEQTHQA AEFIVIDDGS DDKSGAICDA FAAVDKRFVV | 60 |
| IHQKPAGTLV TRKRAFALAT GKWCICLDAD DKLPFNRVLE IEVKLANHHD VDILRFDMEC | 120 |
| FGATPEKIKN YLNFRKEWQG SIHSPYLILD AIYNKAQIGW GMADKIYRTA TVHKTLPFLE | 180 |
| EPFLCCGTDC YQLFLISYFS STFKSIKTEP LYSYRIGSGI STSETNLDKF KEQAKILFIP | 240 |
| NYLRDFLTKE RQLSKYEAML SALSFRLIDA TISRFDLVQY PDSNSAFDLL LLNPSLIKEV | 300 |
| IEQLIRRYQT NQLELAEKIS ESRIFEGKPK KIKRVGIFYH RYFNGGTEKV IFHQIPLLIE | 360 |
| NGFEIFLITE IIDKKQEYFL PSEVKRICLP KEFQNGRAQG LFRALQHNKI DLIIYHAPCS | 420 |
| PTLFFDNLVV RSCGSAFIVT CHNFAPSTIS LFSPHWGKYS SYFKTVDALI TLTSVERDLF | 480 |
| SAYEIPSFLI PNPLFPPICA KGASDLEPRP SSFDKNKKHI IWIGRLENIQ KNYIEAMEIF | 540 |
| KNICSTLPDV TCHIIGKGET PLEEKYVRQF ISDNDLEQRI IYEGFLTSAD KCFKYADIHL | 600 |
| MTSTFECFPM VLSEAMSYGV PTVLYEMPYL ELIKNNKGCI SVPRHHVEKA SQEILRLLTN | 660 |
| ETERHDCSQK TSEAYRSYLA SNLSHIQGLM SLIHKIEEAR VAKPQRNDSF IELWESFVSF | 720 |
| QTETNYQPKV NIKEIQISAY DQKKISRYDN CLSFFLNFAP KDSYRYSFSK RIAKWLYSII | 780 |
| KDKNIKRQD | 789 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.