Information for CAZyme ID: ANP28342.1
Basic Information
| GenBank ID | ANP28342.1 |
| Family | GH2 |
| Sequence Length | 1060 |
| UniProt ID | A0A1B0ZKF2(100,100) |
| Average pLDDT? | 91.77 |
| CAZy50 ID | 11830 |
| CAZy50 Rep | Yes, ANP28342.1 |
| Structure Cluster | SC_GH2_clus84 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1630135 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Dermabacteraceae |
| Genus | Dermabacter |
| Species | Dermabacter vaginalis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSTLSEITSY SPGSGTRISP RSHLSTTAEA MSLAGTWKFA YSRSAEGAGE SAPTVDFDDS | 60 |
| SWDDITVPSH WVLTGGGEYG DFGKYGAPAY QNVQFPFPVE APNVPDDNPT GDYRTRFTLS | 120 |
| ADTIADIEKG TRVYLRTLGI ESLAIISLNG ERAGVVRGSR LTQELDVTDL VVEGENVLHV | 180 |
| RVHQWSSNTY LEDQDQWWLP GIYRDVELLF RPAAGIEDAW LRADFNPKNG PAAPGPGTLI | 240 |
| PEIRAEEAAF PVTVAIDELG ISETFESSAA VGPIAIPEVE PWSADSPRLY TATVSNAAET | 300 |
| LTLRTGFRRV EIVGHEWRVN GKKLRLRGVN RHEYDPKLGR VWDREKAREG LLLMKRHNVN | 360 |
| AIRTSHYPPH PELFDLADEL GFWVMDECDY EAHGFLGENW RDVPANDPRW RDALLDRVER | 420 |
| FFERDKNHPS IISWSLGNEG HTGANMAQMA NWLRRRDPER PVHYEQDYDG QYTDLVSRMY | 480 |
| PPIEAMHEMA LGRGKFGGTI PGRNAELAKR PMILCEYVHA MGNGPGGITE YEEIFDTYPQ | 540 |
| WHGGFVWEWR DHGIAARTAG GTEFYGYGGD FGEQVHDSSF VCDGLVLSSG EATPGLVEFG | 600 |
| AIVSPIKLEF DLAMEGDTER ALDGDFEDVI ITAAYVQDLR HAGDLTDFVF EVIDEVDGRE | 660 |
| VLRRECPVEK VSANGWKSYA GELTLPPFAE GYEGELSGEK FRTIRAVLRE STAWADAGHE | 720 |
| VAFTQVPVED TTRIVVPSHP AALRTTASGE TGAQVEQVQD SDASFALGDA HFDPRTGDLV | 780 |
| KLGSLDLAGP QLRLFRAPTE NDSLGDFGSY ILADPAETTG SGTQAPPTAA LWREIGIDKL | 840 |
| ERRVIGVWLD EHEVRAVHRY STPAGRAYVD LDLTWRLEDA SSNAKGNASR VLRLYADAAP | 900 |
| SANWEYVWGR LGLEFTAPLG AGEASWFGSG PLENYVDSCR AARIGRFSMP VSDLNVEYAV | 960 |
| PQESGYRPGL RELQLSGLGL TVRTDAVGPH RERPGFQVRE HSIEQITKAR HPHELGTPEK | 1020 |
| THLIFDVAQH GLGSRSCGPD VRPEYQLRPR SGSWSLAFEV | 1060 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.77 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MSTLSEITSY SPGSGTRISP RSHLSTTAEA MSLAGTWKFA YSRSAEGAGE SAPTVDFDDS | 60 |
| SWDDITVPSH WVLTGGGEYG DFGKYGAPAY QNVQFPFPVE APNVPDDNPT GDYRTRFTLS | 120 |
| ADTIADIEKG TRVYLRTLGI ESLAIISLNG ERAGVVRGSR LTQELDVTDL VVEGENVLHV | 180 |
| RVHQWSSNTY LEDQDQWWLP GIYRDVELLF RPAAGIEDAW LRADFNPKNG PAAPGPGTLI | 240 |
| PEIRAEEAAF PVTVAIDELG ISETFESSAA VGPIAIPEVE PWSADSPRLY TATVSNAAET | 300 |
| LTLRTGFRRV EIVGHEWRVN GKKLRLRGVN RHEYDPKLGR VWDREKAREG LLLMKRHNVN | 360 |
| AIRTSHYPPH PELFDLADEL GFWVMDECDY EAHGFLGENW RDVPANDPRW RDALLDRVER | 420 |
| FFERDKNHPS IISWSLGNEG HTGANMAQMA NWLRRRDPER PVHYEQDYDG QYTDLVSRMY | 480 |
| PPIEAMHEMA LGRGKFGGTI PGRNAELAKR PMILCEYVHA MGNGPGGITE YEEIFDTYPQ | 540 |
| WHGGFVWEWR DHGIAARTAG GTEFYGYGGD FGEQVHDSSF VCDGLVLSSG EATPGLVEFG | 600 |
| AIVSPIKLEF DLAMEGDTER ALDGDFEDVI ITAAYVQDLR HAGDLTDFVF EVIDEVDGRE | 660 |
| VLRRECPVEK VSANGWKSYA GELTLPPFAE GYEGELSGEK FRTIRAVLRE STAWADAGHE | 720 |
| VAFTQVPVED TTRIVVPSHP AALRTTASGE TGAQVEQVQD SDASFALGDA HFDPRTGDLV | 780 |
| KLGSLDLAGP QLRLFRAPTE NDSLGDFGSY ILADPAETTG SGTQAPPTAA LWREIGIDKL | 840 |
| ERRVIGVWLD EHEVRAVHRY STPAGRAYVD LDLTWRLEDA SSNAKGNASR VLRLYADAAP | 900 |
| SANWEYVWGR LGLEFTAPLG AGEASWFGSG PLENYVDSCR AARIGRFSMP VSDLNVEYAV | 960 |
| PQESGYRPGL RELQLSGLGL TVRTDAVGPH RERPGFQVRE HSIEQITKAR HPHELGTPEK | 1020 |
| THLIFDVAQH GLGSRSCGPD VRPEYQLRPR SGSWSLAFEV | 1060 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.