Information for CAZyme ID: ANE35936.1
Basic Information
| GenBank ID | ANE35936.1 |
| Family | GT38 |
| Sequence Length | 699 |
| UniProt ID | ANE35936.1(MOD) |
| Average pLDDT? | 84.37 |
| CAZy50 ID | 38798 |
| CAZy50 Rep | Yes, ANE35936.1 |
| Structure Cluster | SC_GT38_clus3 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1244531 |
| Kingdom | Bacteria |
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Campylobacteraceae |
| Genus | Campylobacter |
| Species | Campylobacter iguaniorum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSKFTKLVKH PIRYFKDLKI LNGINKFSEM KSYNNMFIVS NLSQLSIINN IIKYEKLSNN | 60 |
| ILVILYTNKN LKMPKLMLEE AKNNFFDEIV LLLLPNSPIN LKLKNYLIMQ KDYIKLINNY | 120 |
| NPSYVYLLSF EAYYSLLANI AKNYNAKLIL IDEGSGTYKD KKNIKISLLK NMVWSGLKLN | 180 |
| SAFDWANNFD KIYALFPEYL KENFICNEFI KFSPHINKFG VYDKTISFVN KYGLTENDII | 240 |
| YTNQRYTVEA NDFVDNIISI LDAISKKLDS KVFIKMHPKD RDETIQLFKE KLASFKNLVL | 300 |
| ISENAFMMEQ VIAYVRPKAV FSLTSTTLIS TCLASGHTKV YSIADWLCEL IPKTKYNLIG | 360 |
| IKQIQEHKAI LYKFKHINFI KDENFDFKFV NKTMKMIDGK LCKIYKNNFK NAYQSHKYYN | 420 |
| AIINFQLAYD NVLFASFDEI VIFLECLNRE YGIGSLNVFS NIFISSIAKV NGSNIILQSK | 480 |
| YKILKKLFKI ALEHIQLGDI EQSFILLDNI FAIFTLHHNK LEICKQDYVF MLLKSEFQDL | 540 |
| YDDLMEFYII SEKKLIDIYN EKKYAQFCYI LKINPILKNK ITIDKYISAL YNTEQYVEIS | 600 |
| KIAENLEIND KNIWNILNTY IKLGYIDMAK NLLDNYAINT IDFEKLTTIS NVYEVAKDYK | 660 |
| KSLEYLDKSV LYNPSKLTSK VRLRKFHLQQ FLKFDLCIK | 699 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.37 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MSKFTKLVKH PIRYFKDLKI LNGINKFSEM KSYNNMFIVS NLSQLSIINN IIKYEKLSNN | 60 |
| ILVILYTNKN LKMPKLMLEE AKNNFFDEIV LLLLPNSPIN LKLKNYLIMQ KDYIKLINNY | 120 |
| NPSYVYLLSF EAYYSLLANI AKNYNAKLIL IDEGSGTYKD KKNIKISLLK NMVWSGLKLN | 180 |
| SAFDWANNFD KIYALFPEYL KENFICNEFI KFSPHINKFG VYDKTISFVN KYGLTENDII | 240 |
| YTNQRYTVEA NDFVDNIISI LDAISKKLDS KVFIKMHPKD RDETIQLFKE KLASFKNLVL | 300 |
| ISENAFMMEQ VIAYVRPKAV FSLTSTTLIS TCLASGHTKV YSIADWLCEL IPKTKYNLIG | 360 |
| IKQIQEHKAI LYKFKHINFI KDENFDFKFV NKTMKMIDGK LCKIYKNNFK NAYQSHKYYN | 420 |
| AIINFQLAYD NVLFASFDEI VIFLECLNRE YGIGSLNVFS NIFISSIAKV NGSNIILQSK | 480 |
| YKILKKLFKI ALEHIQLGDI EQSFILLDNI FAIFTLHHNK LEICKQDYVF MLLKSEFQDL | 540 |
| YDDLMEFYII SEKKLIDIYN EKKYAQFCYI LKINPILKNK ITIDKYISAL YNTEQYVEIS | 600 |
| KIAENLEIND KNIWNILNTY IKLGYIDMAK NLLDNYAINT IDFEKLTTIS NVYEVAKDYK | 660 |
| KSLEYLDKSV LYNPSKLTSK VRLRKFHLQQ FLKFDLCIK | 699 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.