Information for CAZyme ID: ALG08507.1
Basic Information
| GenBank ID | ALG08507.1 |
| Family | CBM42 |
| Sequence Length | 663 |
| UniProt ID | A0A0N9I244(100,100) |
| Average pLDDT? | 80.59 |
| CAZy50 ID | 43407 |
| CAZy50 Rep | Yes, ALG08507.1 |
| Structure Cluster | SC_CBM42_clus8 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 860235 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Kibdelosporangium |
| Species | Kibdelosporangium phytohabitans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRIVKRGLVA VLATATVLGV PAPATASPAA PAAVTETPQS TQEDKARALA RLGVLPEEPM | 60 |
| LRLPDKDFVI LLWRRATGAE VRGSAELAFS GSVAECTHFV KYGLHEAHAR DQRNELRDEA | 120 |
| IARAARQLRA KAATVIGITA EPELLIRGNR DFIHALYGRA TGKRVKEAAF VAFGRPDEEQ | 180 |
| RKFLETGIFT AHASDQQEAI DADKELTEAQ RVKLADRNAI GRAFAVVGVV ATDTMRDLAH | 240 |
| DHVIREIVKH AKKDTDVLVS ASAALLSPAS ADWKAFVDTG IHQANTRDEN RVVEQQKQQN | 300 |
| RRAVEAIVTK ADQTGVQPYL AMMARRALVG GDLAIHRFLR AGQYDALLQS LRTTRRGQEY | 360 |
| HYVDEANGVT IAARDANGVP GSENRMTWKF VPGLAEQGSC YSMEAPARPG YYLRAIDGDD | 420 |
| VAFAPSDGTK GFHDDATWCV EKVPGGVMLR SYAHKAAYFQ EYEGRLRFGG FRAFHYEEAM | 480 |
| GRAASTWAVD PPHPNTVSAI MLRWNNDDAL KASIGNPAGD EVADGPYTRY RPFERGRVYW | 540 |
| TYMFGAKAVH QPLLDAYLRV GAAQSSVYGP PRDDDQTSAD GKGKYNVFSA GGSVYYHPDA | 600 |
| GGAFVLYGGI KHYWDGLGGL NSFLRYPASD EHAGPGRLRR SKFQGGWIDF DPVTGTAQAY | 660 |
| ANP | 663 |
Predicted 3D structure by AlphaFold2 with pLDDT = 80.59 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MRIVKRGLVA VLATATVLGV PAPATASPAA PAAVTETPQS TQEDKARALA RLGVLPEEPM | 60 |
| LRLPDKDFVI LLWRRATGAE VRGSAELAFS GSVAECTHFV KYGLHEAHAR DQRNELRDEA | 120 |
| IARAARQLRA KAATVIGITA EPELLIRGNR DFIHALYGRA TGKRVKEAAF VAFGRPDEEQ | 180 |
| RKFLETGIFT AHASDQQEAI DADKELTEAQ RVKLADRNAI GRAFAVVGVV ATDTMRDLAH | 240 |
| DHVIREIVKH AKKDTDVLVS ASAALLSPAS ADWKAFVDTG IHQANTRDEN RVVEQQKQQN | 300 |
| RRAVEAIVTK ADQTGVQPYL AMMARRALVG GDLAIHRFLR AGQYDALLQS LRTTRRGQEY | 360 |
| HYVDEANGVT IAARDANGVP GSENRMTWKF VPGLAEQGSC YSMEAPARPG YYLRAIDGDD | 420 |
| VAFAPSDGTK GFHDDATWCV EKVPGGVMLR SYAHKAAYFQ EYEGRLRFGG FRAFHYEEAM | 480 |
| GRAASTWAVD PPHPNTVSAI MLRWNNDDAL KASIGNPAGD EVADGPYTRY RPFERGRVYW | 540 |
| TYMFGAKAVH QPLLDAYLRV GAAQSSVYGP PRDDDQTSAD GKGKYNVFSA GGSVYYHPDA | 600 |
| GGAFVLYGGI KHYWDGLGGL NSFLRYPASD EHAGPGRLRR SKFQGGWIDF DPVTGTAQAY | 660 |
| ANP | 663 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.