CAZyme3D

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Entry ID

Information for CAZyme ID: ALC48594.1

Basic Information

GenBank IDALC48594.1
FamilyGT92
Sequence Length504
UniProt IDA0A0M5J5X9(100,100)Download
Average pLDDT?87.22
CAZy50 ID68054
CAZy50 RepYes, ALC48594.1
Structure ClusterSC_GT92_clus12
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID30019
KingdomEukaryota
PhylumArthropoda
ClassInsecta
OrderDiptera
FamilyDrosophilidae
GenusDrosophila
SpeciesDrosophila busckii

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSKATPPPLR  LIEEPLDEQL  VQQLEQELPE  VDYEFWYKYA  KPHSYRYNRS  CAPYADPLEL60
QLHNIYWQSF  QNENVSYRLY  AAYWDERITP  PKVRVLVTAN  QMGQSFPPSH  CQLWYADRAK120
PLLLPVVEHL  SIWIKGWGYK  PQLNYPHLLA  CELPAGEPPR  TVSLVAAACA  RASNSLRVHY180
APRAAPTNAS  VAASLSFGVC  VKGFDFPYVD  LSEPLIEWFE  LQRLLGAARI  YAYMYDVHPS240
VQRVLDYYQR  QGFLELRPLT  MASGMPRLRH  YQHMLLQKRR  LVKRLNELIP  YNDCFYRNMY300
RHDYMLNVDI  DEIVLPLGKL  RSWQQLVQAQ  LLPFAQTKPK  CGGPTALCAI  NGYFTKLLAP360
SAAPDAEPEL  QVLQRTLRYR  NYSLPGRATK  CFHNTRFSLT  LHNHFTLKYL  PTACRPQSFS420
TLLAHMQHYR  EPDANYTRAE  LVEDRAIWRY  APQLRAAVEQ  VWLHLDDAQQ  PELDDVPSEF480
PLQLQEDNES  ELELKQLVQQ  LQLN504

Predicted 3D structure by AlphaFold2 with pLDDT = 87.22 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MSKATPPPLR  LIEEPLDEQL  VQQLEQELPE  VDYEFWYKYA  KPHSYRYNRS  CAPYADPLEL60
QLHNIYWQSF  QNENVSYRLY  AAYWDERITP  PKVRVLVTAN  QMGQSFPPSH  CQLWYADRAK120
PLLLPVVEHL  SIWIKGWGYK  PQLNYPHLLA  CELPAGEPPR  TVSLVAAACA  RASNSLRVHY180
APRAAPTNAS  VAASLSFGVC  VKGFDFPYVD  LSEPLIEWFE  LQRLLGAARI  YAYMYDVHPS240
VQRVLDYYQR  QGFLELRPLT  MASGMPRLRH  YQHMLLQKRR  LVKRLNELIP  YNDCFYRNMY300
RHDYMLNVDI  DEIVLPLGKL  RSWQQLVQAQ  LLPFAQTKPK  CGGPTALCAI  NGYFTKLLAP360
SAAPDAEPEL  QVLQRTLRYR  NYSLPGRATK  CFHNTRFSLT  LHNHFTLKYL  PTACRPQSFS420
TLLAHMQHYR  EPDANYTRAE  LVEDRAIWRY  APQLRAAVEQ  VWLHLDDAQQ  PELDDVPSEF480
PLQLQEDNES  ELELKQLVQQ  LQLN504

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT92(197-438)

MSKATPPPLR  LIEEPLDEQL  VQQLEQELPE  VDYEFWYKYA  KPHSYRYNRS  CAPYADPLEL60
QLHNIYWQSF  QNENVSYRLY  AAYWDERITP  PKVRVLVTAN  QMGQSFPPSH  CQLWYADRAK120
PLLLPVVEHL  SIWIKGWGYK  PQLNYPHLLA  CELPAGEPPR  TVSLVAAACA  RASNSLRVHY180
APRAAPTNAS  VAASLSFGVC  VKGFDFPYVD  LSEPLIEWFE  LQRLLGAARI  YAYMYDVHPS240
VQRVLDYYQR  QGFLELRPLT  MASGMPRLRH  YQHMLLQKRR  LVKRLNELIP  YNDCFYRNMY300
RHDYMLNVDI  DEIVLPLGKL  RSWQQLVQAQ  LLPFAQTKPK  CGGPTALCAI  NGYFTKLLAP360
SAAPDAEPEL  QVLQRTLRYR  NYSLPGRATK  CFHNTRFSLT  LHNHFTLKYL  PTACRPQSFS420
TLLAHMQHYR  EPDANYTRAE  LVEDRAIWRY  APQLRAAVEQ  VWLHLDDAQQ  PELDDVPSEF480
PLQLQEDNES  ELELKQLVQQ  LQLN504

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help