Information for CAZyme ID: AKP45383.1
Basic Information
GenBank ID | AKP45383.1 |
Family | CBM20, CBM25, GH119 |
Sequence Length | 1267 |
UniProt ID | A0A0H4NYZ6(100,100)![]() |
Average pLDDT? | 88.13 |
CAZy50 ID | 2829 |
CAZy50 Rep | No, QMV42548.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1679164 |
Kingdom | Bacteria |
Phylum | Myxococcota |
Class | Myxococcia |
Order | Myxococcales |
Family | Archangiaceae |
Genus | Cystobacter |
Species | Cystobacter sp. Cbv34 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MHRVKPLIGP VLSALLLCAL PARAQIAAAH VYHNHMPNFW AYYDLGQYAS TPTGGPIRYM | 60 |
YDAQVINLKK NPPSNYTYYL PSGAPMPHDD LVTYYSHNAK TGAYLYWPPS VASDMKTNAP | 120 |
TGQVHVTMSG AVVNNVQDLV TLKNVPGYDN PNWGASWKDR YSALLTPAGN RTLDLIHFTG | 180 |
HHSMGPLVGP DYFLKDLIYQ SATLAQPYFL GGSFQSSKGF FPTELGFSER LIPTLSKLGV | 240 |
QWAVIGDNHF SRTLKDYPYL NDPGSDTLVS PPNRADLQNT SSVGSWVSAQ MAHEQQVIKN | 300 |
KYPFASTPHW VRYVDPATGA ESRVVGIPVN QNGSWLEGWE GEATVDVVNL KSFEGLVPQR | 360 |
QFFVIAHDGD NSSGRAGSDS TWYNGRSVTC ANGVQCVGIS EYLVHHTPAS TDVVHVQDGS | 420 |
WVDTRDSSSD PQWHHWKLPF GIWKGQFPAF NAATGLNLSP KTNLSGVQEG MTVSLEHGWH | 480 |
YLERNFALLQ AALNYAKTAE QIWLDAHPNH WSPTTAIDKQ ITHTGNQLNP WMMSFPVKGD | 540 |
VNNDWAGGAN PAELAWYFLL PAMDSGFGYY DENQDDNVKP TLSFNQSLYF SKPYVQQRIA | 600 |
QDKTGPSVWW AQRWPYNPGS ANTDKSEGWT LHFFNNHFAL YTYAYDASGI SSIKARVRVH | 660 |
THKSIDPLDN THKVYDPAAR KAAGVPNIDP ARVGAWVDYP LTRRDLKPVM NGVSWQPAYL | 720 |
PVMAKVPAQE IGDLYYVYLG NYRDQLLDYY IEATDSRGNI TRGEIQSVYV GSGRYNLVGG | 780 |
KYIEDPNGTV QGTHPFLVVD TTAPSVPSGL TAKAKTDRSV TLSWSAASDN VAVSGYDVFR | 840 |
DGTQVGSSTS TAYTDSGLSP STQYSYTVRA RDAAGNASAQ STALSVATLT PDTTPPSVPS | 900 |
GLTASGTTSS SVALAWTAST DNYGVANYEV LRNGTQVASV TGTTYSDTGL SPSTTYSYTV | 960 |
RARDAAGNVS SPSTALSVTT QTGNSATVYY FNNNFALKYI HFRIGGGTWT TVPGNVMATS | 1020 |
EVPGYAKYTV NLGAATQLEC VFNDGKGTWD NNKGNNYLLP AGTSTVKDGV VSSGAPALDT | 1080 |
TAPSVPSGLT AASKTSSSVS LSWSASTDAS GIAGYDVYRD GSLVGSPVST SYTDSDLSAG | 1140 |
TTYRYTVRAR DTAGNASAQS TALSVTTSTS SATSVTFNVT ASTVVGQNVY LVGNHAALGN | 1200 |
WNTGAAILLS PASYPKWSVT LSLPGSTALE YKYIKKDGSG NVTWESGANR STTIPASGTA | 1260 |
TLNDTWK | 1267 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.13 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH119(11-888)
MHRVKPLIGP VLSALLLCAL PARAQIAAAH VYHNHMPNFW AYYDLGQYAS TPTGGPIRYM | 60 |
YDAQVINLKK NPPSNYTYYL PSGAPMPHDD LVTYYSHNAK TGAYLYWPPS VASDMKTNAP | 120 |
TGQVHVTMSG AVVNNVQDLV TLKNVPGYDN PNWGASWKDR YSALLTPAGN RTLDLIHFTG | 180 |
HHSMGPLVGP DYFLKDLIYQ SATLAQPYFL GGSFQSSKGF FPTELGFSER LIPTLSKLGV | 240 |
QWAVIGDNHF SRTLKDYPYL NDPGSDTLVS PPNRADLQNT SSVGSWVSAQ MAHEQQVIKN | 300 |
KYPFASTPHW VRYVDPATGA ESRVVGIPVN QNGSWLEGWE GEATVDVVNL KSFEGLVPQR | 360 |
QFFVIAHDGD NSSGRAGSDS TWYNGRSVTC ANGVQCVGIS EYLVHHTPAS TDVVHVQDGS | 420 |
WVDTRDSSSD PQWHHWKLPF GIWKGQFPAF NAATGLNLSP KTNLSGVQEG MTVSLEHGWH | 480 |
YLERNFALLQ AALNYAKTAE QIWLDAHPNH WSPTTAIDKQ ITHTGNQLNP WMMSFPVKGD | 540 |
VNNDWAGGAN PAELAWYFLL PAMDSGFGYY DENQDDNVKP TLSFNQSLYF SKPYVQQRIA | 600 |
QDKTGPSVWW AQRWPYNPGS ANTDKSEGWT LHFFNNHFAL YTYAYDASGI SSIKARVRVH | 660 |
THKSIDPLDN THKVYDPAAR KAAGVPNIDP ARVGAWVDYP LTRRDLKPVM NGVSWQPAYL | 720 |
PVMAKVPAQE IGDLYYVYLG NYRDQLLDYY IEATDSRGNI TRGEIQSVYV GSGRYNLVGG | 780 |
KYIEDPNGTV QGTHPFLVVD TTAPSVPSGL TAKAKTDRSV TLSWSAASDN VAVSGYDVFR | 840 |
DGTQVGSSTS TAYTDSGLSP STQYSYTVRA RDAAGNASAQ STALSVATLT PDTTPPSVPS | 900 |
GLTASGTTSS SVALAWTAST DNYGVANYEV LRNGTQVASV TGTTYSDTGL SPSTTYSYTV | 960 |
RARDAAGNVS SPSTALSVTT QTGNSATVYY FNNNFALKYI HFRIGGGTWT TVPGNVMATS | 1020 |
EVPGYAKYTV NLGAATQLEC VFNDGKGTWD NNKGNNYLLP AGTSTVKDGV VSSGAPALDT | 1080 |
TAPSVPSGLT AASKTSSSVS LSWSASTDAS GIAGYDVYRD GSLVGSPVST SYTDSDLSAG | 1140 |
TTYRYTVRAR DTAGNASAQS TALSVTTSTS SATSVTFNVT ASTVVGQNVY LVGNHAALGN | 1200 |
WNTGAAILLS PASYPKWSVT LSLPGSTALE YKYIKKDGSG NVTWESGANR STTIPASGTA | 1260 |
TLNDTWK | 1267 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.