CAZyme3D

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Entry ID

Information for CAZyme ID: AKF93181.1

Basic Information

GenBank IDAKF93181.1
FamilyCE4, GH171
Sequence Length702
UniProt IDA0A0F6XZ54(100,100)Download
Average pLDDT?84.12
CAZy50 ID37936
CAZy50 RepNo, AYK06634.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1465
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusBrevibacillus
SpeciesBrevibacillus laterosporus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRKGILFLTC  LIMLMFVSDR  NSYANPPSIR  LGDDVLITKY  HHLIDGKRIG  LVTNQTGMNS60
QGQSIIDVLA  KYHNATLAAL  YGPEHGIDGQ  ARAGAYVESY  IHKDWNIPVY  SLYGKTRKPT120
ANMLKNVDVL  VFDLQDIGAR  SYTYISTLHD  VMEAAREHKK  PLIVLDRPNP  LGGKIVDGPV180
LTPPYLSFVG  VDELPLAHGM  TIGELAQFFN  RKIGVHLTII  PMDYYARGMI  FQDTGLTWVK240
SSPQVPNLAS  VFGYLATGLG  EGIGLQHSDN  FKWVGAEGIQ  ANQLAKMLND  ADLPGVVFVP300
ETKGFAGGVR  LQIIDYHAFN  PARTGMYVLA  YANQLTSSVM  KNQDKRFNSD  QFDKIMGSSE360
LRKALARKAS  PEELEALYAP  MVNSFKMERL  PYLIYEDIGK  EYMGAIVDSG  KKATVEPKPD420
STSPEPTPEP  KPKPESKPEP  STTKPVAKPT  PKPDVTTPVP  GTETKPNPTT  SGQKPDTTTT480
KPVSSQKVAH  LTFDDGPSNV  TVQILDVLKQ  HNIKATFFVL  GRNVKGNEAI  LRRMLAEGHT540
IGNHTHSHDY  NKIYKNPQAF  FTDLKQSEAE  IQKITGEKPS  MIRFPGGSNN  GVSKKAQDTT600
IYGANKWVMN  DIVKEAKNQG  YTYFDWNVSS  GDARSNSYTP  QEVIRNVKNG  SANKHEVVIL660
MHDTKAKEST  LKALPQVIAD  LKKQGFTFEA  LQPTSKTVQF  LK702

Predicted 3D structure by AlphaFold2 with pLDDT = 84.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH171(49-395)+CE4(485-593)

MRKGILFLTC  LIMLMFVSDR  NSYANPPSIR  LGDDVLITKY  HHLIDGKRIG  LVTNQTGMNS60
QGQSIIDVLA  KYHNATLAAL  YGPEHGIDGQ  ARAGAYVESY  IHKDWNIPVY  SLYGKTRKPT120
ANMLKNVDVL  VFDLQDIGAR  SYTYISTLHD  VMEAAREHKK  PLIVLDRPNP  LGGKIVDGPV180
LTPPYLSFVG  VDELPLAHGM  TIGELAQFFN  RKIGVHLTII  PMDYYARGMI  FQDTGLTWVK240
SSPQVPNLAS  VFGYLATGLG  EGIGLQHSDN  FKWVGAEGIQ  ANQLAKMLND  ADLPGVVFVP300
ETKGFAGGVR  LQIIDYHAFN  PARTGMYVLA  YANQLTSSVM  KNQDKRFNSD  QFDKIMGSSE360
LRKALARKAS  PEELEALYAP  MVNSFKMERL  PYLIYEDIGK  EYMGAIVDSG  KKATVEPKPD420
STSPEPTPEP  KPKPESKPEP  STTKPVAKPT  PKPDVTTPVP  GTETKPNPTT  SGQKPDTTTT480
KPVSSQKVAH  LTFDDGPSNV  TVQILDVLKQ  HNIKATFFVL  GRNVKGNEAI  LRRMLAEGHT540
IGNHTHSHDY  NKIYKNPQAF  FTDLKQSEAE  IQKITGEKPS  MIRFPGGSNN  GVSKKAQDTT600
IYGANKWVMN  DIVKEAKNQG  YTYFDWNVSS  GDARSNSYTP  QEVIRNVKNG  SANKHEVVIL660
MHDTKAKEST  LKALPQVIAD  LKKQGFTFEA  LQPTSKTVQF  LK702

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help