Information for CAZyme ID: AJI75565.1
Basic Information
| GenBank ID | AJI75565.1 |
| Family | CBM5, CBM73, GH18 |
| Sequence Length | 800 |
| UniProt ID | A0A0B6ER15(100,100) |
| Average pLDDT? | 86.68 |
| CAZy50 ID | 24899 |
| CAZy50 Rep | No, AEI36637.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 539329 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Francisellaceae |
| Genus | Francisella |
| Species | Francisella philomiragia |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKNKLKLTPA MLCALMGVSS FSIANATDAW STSKVSSYVA GTQVTDGGKT YQCKEWPASG | 60 |
| WCQNTAYKPS GIYGADAWDV VGDSPVDPVD PVDPVDPVDP VDPVNPVDPV NPSSTEWDSN | 120 |
| KTYVKGDTVT YNGDTFTAKW WTQGETPNKE SKWGVWEYNG EASQSKGTVS IVLPAKPDFI | 180 |
| ANGKLADVQI LKDGKIVAEV NNANWGSTKN IEVEVGESSD LTINVPAIDG ATGAANPAAF | 240 |
| TLAKNSSKTV NVEYTASNPA EQGSITINPQ ADVSGNPITS YSLTDSNGNV VASGDLEINK | 300 |
| VTTLEKISAS EDGVNYTLTI GSFISGGFNY TPTGTYPVTV YNFNTSNVDV TFTKQAIPTE | 360 |
| NVRISVDGLP ENKSTTLTLS NKNGDSEKVS VDSNSTISLD IPKDGTVWKA SVDAISGFKA | 420 |
| VISPASFTAN NDAQNINVNF EQQAPIEAGK KIMGYWENWK PGLISGDYKG SAEDVAPYTH | 480 |
| ILYSFLTLDS SPNPENPANK AWSSGHINES MAGADVLSVM GNYENAWDNN SNWQRVRIDS | 540 |
| LIDLTHANGG KFIWAIGGWS DLQQTIGDSQ IDAFVNQVVE LLKLGGDGVD FDWEHLSQLA | 600 |
| DGSPNPNKDQ QLTTLAKTLK TLRERLDAEG MSDKQIGYTT RFNAFFESSK AHGFANDFNS | 660 |
| DGEGIAIDKW LKDNGSSLDQ VVNWVNIMAY DVGPNDMPNG KTWTKDVYTD MLKSFSEYVN | 720 |
| PSLVVLGFEP GGQAASGEWE GLTLDKEMID YVSDNNYGGS MFWAVNQVAM NTASTYYPNV | 780 |
| VTGENVNELA SYSKEAFAEE | 800 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.68 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM73(35-79)+CBM5(116-156)+GH18(450-729)
| MKNKLKLTPA MLCALMGVSS FSIANATDAW STSKVSSYVA GTQVTDGGKT YQCKEWPASG | 60 |
| WCQNTAYKPS GIYGADAWDV VGDSPVDPVD PVDPVDPVDP VDPVNPVDPV NPSSTEWDSN | 120 |
| KTYVKGDTVT YNGDTFTAKW WTQGETPNKE SKWGVWEYNG EASQSKGTVS IVLPAKPDFI | 180 |
| ANGKLADVQI LKDGKIVAEV NNANWGSTKN IEVEVGESSD LTINVPAIDG ATGAANPAAF | 240 |
| TLAKNSSKTV NVEYTASNPA EQGSITINPQ ADVSGNPITS YSLTDSNGNV VASGDLEINK | 300 |
| VTTLEKISAS EDGVNYTLTI GSFISGGFNY TPTGTYPVTV YNFNTSNVDV TFTKQAIPTE | 360 |
| NVRISVDGLP ENKSTTLTLS NKNGDSEKVS VDSNSTISLD IPKDGTVWKA SVDAISGFKA | 420 |
| VISPASFTAN NDAQNINVNF EQQAPIEAGK KIMGYWENWK PGLISGDYKG SAEDVAPYTH | 480 |
| ILYSFLTLDS SPNPENPANK AWSSGHINES MAGADVLSVM GNYENAWDNN SNWQRVRIDS | 540 |
| LIDLTHANGG KFIWAIGGWS DLQQTIGDSQ IDAFVNQVVE LLKLGGDGVD FDWEHLSQLA | 600 |
| DGSPNPNKDQ QLTTLAKTLK TLRERLDAEG MSDKQIGYTT RFNAFFESSK AHGFANDFNS | 660 |
| DGEGIAIDKW LKDNGSSLDQ VVNWVNIMAY DVGPNDMPNG KTWTKDVYTD MLKSFSEYVN | 720 |
| PSLVVLGFEP GGQAASGEWE GLTLDKEMID YVSDNNYGGS MFWAVNQVAM NTASTYYPNV | 780 |
| VTGENVNELA SYSKEAFAEE | 800 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.