Information for CAZyme ID: AEI36637.1
Basic Information
| GenBank ID | AEI36637.1 |
| Family | CBM5, CBM73, GH18 |
| Sequence Length | 826 |
| UniProt ID | F8G9V5(100,100) |
| Average pLDDT? | 81.91 |
| CAZy50 ID | 24899 |
| CAZy50 Rep | Yes, AEI36637.1 |
| Structure Cluster | SC_CBM5_clus12, SC_CBM5_clus2, SC_CBM73_clus11, SC_CBM73_clus12, SC_GH18_clus362 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 573569 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Francisellaceae |
| Genus | Francisella |
| Species | Francisella salina |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKNKLKLTPT MICALMGIGS FSVANATDAW STSKLSSYVA GSQVTDSGKT YQCKEWPASG | 60 |
| WCQIAAYQPS GTYGSDAWNV ISDNTDNTDN TDNTDNTDNT DNTDNTDNTD NTDNTDNTDN | 120 |
| TDNTDNTDNT DNTDNTSSSS DWSSTQIYTK GDSVTYNGES YTAKWWTQGE TPNKDSKWGV | 180 |
| WEYNGEAAQG QGTVSIVLPA KPDFVSTSTL ADVQILKNGT KIAELNNAQW GSTTKLDVTV | 240 |
| GDSANLTISV TALDGAIGSA SPASFTLAKG ASQTVSVEYT KSSTTGEGSI SINPQADVSG | 300 |
| NPTTSYTLTD ANGNVVSSGS LEINKAITLD NIPSSEDGIV YTLTVDSFIS NGYSYTPSET | 360 |
| YSIGVYNYNT SNADVTFTKQ AIPTENVAIT VSGLPDGKST TLTLSNSSGD TKEVTINSNS | 420 |
| TVSAEIPKDN TLWTVAVASL TGYKISTSPS SFTTNQDSQS ISVTFEQQAP IEDGKKVIGY | 480 |
| WENWKPGLIS GSYSGSAEDV APYTHVLYSF LTLDSSPNPD NPANKQWSTG HLNESMAGAD | 540 |
| VLSVMGVYEN SWDNSSNWQR VRIDSLIDLT HANGGKFIWA IGGWSDLQQT ISDSQIDAFV | 600 |
| NQIVELLKLG GDGVDFDWEH LSQLADGSVN PNKDQQLATL AKTLKTLREK LDAEGMSDKQ | 660 |
| IGYTTRFNAF FESSKAHGFS NDFNSDGEGI AIEKWLEENG SSLDKVVNWV NIMAYDVGPT | 720 |
| DMPNGQTWTA NVYEDVLSSF AKYVNPSLIV LGFEPGGQAA GGEWEGLTLD KEMIDYVSDN | 780 |
| GFGGSMFWAI NQVAMGTAST YYQNTVTGTN VHDLANYSQE AFAEEE | 826 |
Predicted 3D structure by AlphaFold2 with pLDDT = 81.91 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKNKLKLTPT MICALMGIGS FSVANATDAW STSKLSSYVA GSQVTDSGKT YQCKEWPASG | 60 |
| WCQIAAYQPS GTYGSDAWNV ISDNTDNTDN TDNTDNTDNT DNTDNTDNTD NTDNTDNTDN | 120 |
| TDNTDNTDNT DNTDNTSSSS DWSSTQIYTK GDSVTYNGES YTAKWWTQGE TPNKDSKWGV | 180 |
| WEYNGEAAQG QGTVSIVLPA KPDFVSTSTL ADVQILKNGT KIAELNNAQW GSTTKLDVTV | 240 |
| GDSANLTISV TALDGAIGSA SPASFTLAKG ASQTVSVEYT KSSTTGEGSI SINPQADVSG | 300 |
| NPTTSYTLTD ANGNVVSSGS LEINKAITLD NIPSSEDGIV YTLTVDSFIS NGYSYTPSET | 360 |
| YSIGVYNYNT SNADVTFTKQ AIPTENVAIT VSGLPDGKST TLTLSNSSGD TKEVTINSNS | 420 |
| TVSAEIPKDN TLWTVAVASL TGYKISTSPS SFTTNQDSQS ISVTFEQQAP IEDGKKVIGY | 480 |
| WENWKPGLIS GSYSGSAEDV APYTHVLYSF LTLDSSPNPD NPANKQWSTG HLNESMAGAD | 540 |
| VLSVMGVYEN SWDNSSNWQR VRIDSLIDLT HANGGKFIWA IGGWSDLQQT ISDSQIDAFV | 600 |
| NQIVELLKLG GDGVDFDWEH LSQLADGSVN PNKDQQLATL AKTLKTLREK LDAEGMSDKQ | 660 |
| IGYTTRFNAF FESSKAHGFS NDFNSDGEGI AIEKWLEENG SSLDKVVNWV NIMAYDVGPT | 720 |
| DMPNGQTWTA NVYEDVLSSF AKYVNPSLIV LGFEPGGQAA GGEWEGLTLD KEMIDYVSDN | 780 |
| GFGGSMFWAI NQVAMGTAST YYQNTVTGTN VHDLANYSQE AFAEEE | 826 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.