CAZyme3D

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Entry ID

Information for CAZyme ID: AIY11708.1

Basic Information

GenBank IDAIY11708.1
FamilyCE12
Sequence Length403
UniProt IDA0A806PIY2(100,100)Download
Average pLDDT?93.11
CAZy50 ID1223
CAZy50 RepNo, WHY22263.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1406
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A806PIY2.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIGLCVGFSL  LFATILIPGQ  ALAEKQLAAP  LRFDFGPGDV  ADGYTQVTAK  DAYTPERGYG60
FTDLSKVNEE  NRGGSDAIRS  DFVRVQGSSF  VVNLPPADYT  LSLIAGDTAG  NTDITVKAES120
IVKVEPTTKT  AGQFVEAAFE  LALIDGQLEL  YFSGNEAKIN  ALVITPKEAR  TAGDHPSVYL180
AGDSTVQTYK  ASMKPQAGWG  QMIAPFFTDE  TIFVNRSIGG  RSTKTFLVQG  RLDDILRNIR240
PGDYLFIQFG  HNDAAINNQE  RYVSPADYKV  YLKTYIQGAT  QRGAIPVLIT  PVGRRDYDAA300
SASFRISFPE  YVQAMKETAS  ETGVALINLS  QLSVAYYDTL  GLEGTLPLFL  HLEPGVFPAF360
PDGVKDDTHF  QEYGAEQIAR  LVAQGVRDLN  IPLSSNVKTE  NLQ403

Predicted 3D structure by AlphaFold2 with pLDDT = 93.11 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CE12(178-385)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help