Information for CAZyme ID: AIF16460.1
Basic Information
GenBank ID | AIF16460.1 |
Family | GT4 |
Sequence Length | 363 |
UniProt ID | A0A075HMK6(100,100)![]() |
Average pLDDT? | 91.21 |
CAZy50 ID | 124124 |
CAZy50 Rep | Yes, AIF16460.1 |
Structure Cluster | SC_GT4_clus864 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1456270 |
Kingdom | Archaea |
Phylum | Nitrososphaerota |
Class | |
Order | |
Family | |
Genus | |
Species | uncultured marine thaumarchaeote KM3_74_C10 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRILHLLYDS PHNPWIGGGA AIRAHQVYRR FPQEFEINIV SGGYANCPRE ESHGNFLVSY | 60 |
GPETRSAIGS GLQYMLKSHQ RLSKDSYDLV VEDFSPFTPC FSPIFARAPV VTLMQNIFGK | 120 |
HLVARYGLAG TVPALVEATT RRLHSNFLFV SPLFANWTKK FQNKMTAIIP NGVEDELLKL | 180 |
EPNDEGFLLF IGRLERYQKG LDLMIEALAN GIDHEFDVVI AGDGPDHLDL KQRIESKNLA | 240 |
RRIRMIGRVS ENEKRDLLRR CSAVIVPSRF EAWSLVALEA AASCKPVIGF AIPGINGIVK | 300 |
SGITGVLARP FEINQLSTAI SHVMNDHYLR RKLGKEARKE AKEFTWTVVA KRQLEFYEQV | 360 |
RAG | 363 |
Predicted 3D structure by AlphaFold2 with pLDDT = 91.21 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRILHLLYDS PHNPWIGGGA AIRAHQVYRR FPQEFEINIV SGGYANCPRE ESHGNFLVSY | 60 |
GPETRSAIGS GLQYMLKSHQ RLSKDSYDLV VEDFSPFTPC FSPIFARAPV VTLMQNIFGK | 120 |
HLVARYGLAG TVPALVEATT RRLHSNFLFV SPLFANWTKK FQNKMTAIIP NGVEDELLKL | 180 |
EPNDEGFLLF IGRLERYQKG LDLMIEALAN GIDHEFDVVI AGDGPDHLDL KQRIESKNLA | 240 |
RRIRMIGRVS ENEKRDLLRR CSAVIVPSRF EAWSLVALEA AASCKPVIGF AIPGINGIVK | 300 |
SGITGVLARP FEINQLSTAI SHVMNDHYLR RKLGKEARKE AKEFTWTVVA KRQLEFYEQV | 360 |
RAG | 363 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.