Information for CAZyme ID: AHN97894.1
Basic Information
GenBank ID | AHN97894.1 |
Family | GT2 |
Sequence Length | 706 |
UniProt ID | X2L848(100,100)![]() |
Average pLDDT? | 86.70 |
CAZy50 ID | 37959 |
CAZy50 Rep | Yes, AHN97894.1 |
Structure Cluster | SC_GT2_clus700 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1447238 |
Kingdom | Bacteria |
Phylum | |
Class | |
Order | |
Family | |
Genus | |
Species | uncultured bacterium lac146 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLQELVLDAK NVPPGWALVE GNLGRRGRHL SSSLRMLRSD AGPTEEVPLA ALASGRIFEL | 60 |
IRFPANVGKI VWRPPLIGQY DRSQIRIRRI GWIKRTVLMA VRVLRTYLRL APEEREECGL | 120 |
SLPHALFDLP GAYRICTDFR VRMWTQPYSE WIERHDTLSE RDRGRIREHI ERFASRPRFH | 180 |
LVVAAHGEGG VEAVRRSVAS LDAQLYREYD CTVVDPHGAL AAGGDGVPAK GRGELAPWLS | 240 |
DFNTRLAAGH SRDWIVLMRA GDTLPPQSLY WLAWQIQAAV DAAVVYSDDD AMDEAGARHD | 300 |
PRFKPDWSPE HLRAVHYIGS AAAMRGDAIA AAGGIRPECC RHGNYDLLLR IVDAGPARVV | 360 |
HVPAVLYHRA LRGQGEWESG PSCNVALKAH LARNRVEADI MPAPPAGRHI RYRLPDSPPL | 420 |
VTIVIPTRDA LALLERCVES LLEKTTYPRY ELLVVDNRSR TPDALAYLQR ISTHPRVRVV | 480 |
RYRRRFNYSA INNFASRLAQ GEALCLLNND TEIISPDWLE EMVGHLIQKR VGAVGAKLYY | 540 |
PDGRVQHAGV TVGPGGCATH LHLDLDRATG GYCGRAAIAQ ELSAVTGACL LTWKSVYQEL | 600 |
GGLEEKRLTV GFNDIDYCMR LREAGWRVIF TPHAELYHHE SATRGNDDPL PRRLRARREV | 660 |
QFMRRRWRER MTNDPYYNPN LSYRRPDFAL GESRRVRRPW QHPASS | 706 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.70 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MLQELVLDAK NVPPGWALVE GNLGRRGRHL SSSLRMLRSD AGPTEEVPLA ALASGRIFEL | 60 |
IRFPANVGKI VWRPPLIGQY DRSQIRIRRI GWIKRTVLMA VRVLRTYLRL APEEREECGL | 120 |
SLPHALFDLP GAYRICTDFR VRMWTQPYSE WIERHDTLSE RDRGRIREHI ERFASRPRFH | 180 |
LVVAAHGEGG VEAVRRSVAS LDAQLYREYD CTVVDPHGAL AAGGDGVPAK GRGELAPWLS | 240 |
DFNTRLAAGH SRDWIVLMRA GDTLPPQSLY WLAWQIQAAV DAAVVYSDDD AMDEAGARHD | 300 |
PRFKPDWSPE HLRAVHYIGS AAAMRGDAIA AAGGIRPECC RHGNYDLLLR IVDAGPARVV | 360 |
HVPAVLYHRA LRGQGEWESG PSCNVALKAH LARNRVEADI MPAPPAGRHI RYRLPDSPPL | 420 |
VTIVIPTRDA LALLERCVES LLEKTTYPRY ELLVVDNRSR TPDALAYLQR ISTHPRVRVV | 480 |
RYRRRFNYSA INNFASRLAQ GEALCLLNND TEIISPDWLE EMVGHLIQKR VGAVGAKLYY | 540 |
PDGRVQHAGV TVGPGGCATH LHLDLDRATG GYCGRAAIAQ ELSAVTGACL LTWKSVYQEL | 600 |
GGLEEKRLTV GFNDIDYCMR LREAGWRVIF TPHAELYHHE SATRGNDDPL PRRLRARREV | 660 |
QFMRRRWRER MTNDPYYNPN LSYRRPDFAL GESRRVRRPW QHPASS | 706 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.