Information for CAZyme ID: AHF93203.1
Basic Information
GenBank ID | AHF93203.1 |
Family | GH50 |
Sequence Length | 846 |
UniProt ID | W0J865(100,100)![]() |
Average pLDDT? | 82.53 |
CAZy50 ID | 23262 |
CAZy50 Rep | Yes, AHF93203.1 |
Structure Cluster | SC_GH50_clus18 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 794903 |
Kingdom | Bacteria |
Phylum | Verrucomicrobiota |
Class | Opitutae |
Order | Opitutales |
Family | Opitutaceae |
Genus | |
Species | Opitutaceae bacterium TAV5 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MVLFPYTRIF LPSYSPPRFS FLALSLALTA TLSFSQIAAV QEVETHAKGT PDSGTPRSVN | 60 |
IAETHVLLDY DAASPDASPA PLQLSASGGA RQEKTTPALA RTDIARVNKI TTKNWWLILT | 120 |
LPGTYPVEGT TLAFDYYVPE SSALRSFTTN EKQPSIATRA IRKGRWVSEE IAFADMVGGD | 180 |
LWRLRDVRDI KNPTLTFSAT RSGGIEIEIA RITITRRATM PLPIPRVIRP ARPDAQPVFA | 240 |
KEIEIANTDK NAWCQIMADG DFTLTINDRE AGRGGYNHID MERWPQGNRF LPLAREIPVG | 300 |
EYLVPGKNII RVSVSSPHTA PELVFALGWQ DNNERHVVIS DATWATIPSP ALDAATSTPC | 360 |
EDLGSLPSSD SRRFKSPVDI YPLLIPRPWD TRSYLSAPLD AFPQMEHTAD VLRPRIIPGT | 420 |
WNIKKVGQRW SIIDPTGAPF FLLTTQTDYV HPRWAYRYSR HIYNTYKTEA DWTAHDVDAI | 480 |
KRLGFNSLSV SFHEEHYKHA KTLGMSSFRF LGASGLASPK LRNKDGKTAR MPDPFDPSWR | 540 |
SSFSEKLENQ AAKWKDDSII GVFVDNELSL DGALHNASVV GYVYSDAAGK QFVGWLRERY | 600 |
RTIDDLNRAW FGAAPDKKAA RLSSFDDILV KKPAPVREKS KGLNHTQKSP TADTPAMDRD | 660 |
FYDFAMLVVQ EYANYVLKEV RRIMPGKLVA TNRFMGGATV EVLAAWKDYD IIGWNAYPMD | 720 |
RWDSGEYTQT QIDRMKLAWQ VTGKPMIISE FGSQGLDSES SPSPTGKLAT QKRRGEEYGK | 780 |
VLDQILRECP FVVGFALFSW MDSTEGERSN WGMVNPEGQP YRDYLDGIVH QHRKLNDMLP | 840 |
PLLATE | 846 |
Predicted 3D structure by AlphaFold2 with pLDDT = 82.53 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MVLFPYTRIF LPSYSPPRFS FLALSLALTA TLSFSQIAAV QEVETHAKGT PDSGTPRSVN | 60 |
IAETHVLLDY DAASPDASPA PLQLSASGGA RQEKTTPALA RTDIARVNKI TTKNWWLILT | 120 |
LPGTYPVEGT TLAFDYYVPE SSALRSFTTN EKQPSIATRA IRKGRWVSEE IAFADMVGGD | 180 |
LWRLRDVRDI KNPTLTFSAT RSGGIEIEIA RITITRRATM PLPIPRVIRP ARPDAQPVFA | 240 |
KEIEIANTDK NAWCQIMADG DFTLTINDRE AGRGGYNHID MERWPQGNRF LPLAREIPVG | 300 |
EYLVPGKNII RVSVSSPHTA PELVFALGWQ DNNERHVVIS DATWATIPSP ALDAATSTPC | 360 |
EDLGSLPSSD SRRFKSPVDI YPLLIPRPWD TRSYLSAPLD AFPQMEHTAD VLRPRIIPGT | 420 |
WNIKKVGQRW SIIDPTGAPF FLLTTQTDYV HPRWAYRYSR HIYNTYKTEA DWTAHDVDAI | 480 |
KRLGFNSLSV SFHEEHYKHA KTLGMSSFRF LGASGLASPK LRNKDGKTAR MPDPFDPSWR | 540 |
SSFSEKLENQ AAKWKDDSII GVFVDNELSL DGALHNASVV GYVYSDAAGK QFVGWLRERY | 600 |
RTIDDLNRAW FGAAPDKKAA RLSSFDDILV KKPAPVREKS KGLNHTQKSP TADTPAMDRD | 660 |
FYDFAMLVVQ EYANYVLKEV RRIMPGKLVA TNRFMGGATV EVLAAWKDYD IIGWNAYPMD | 720 |
RWDSGEYTQT QIDRMKLAWQ VTGKPMIISE FGSQGLDSES SPSPTGKLAT QKRRGEEYGK | 780 |
VLDQILRECP FVVGFALFSW MDSTEGERSN WGMVNPEGQP YRDYLDGIVH QHRKLNDMLP | 840 |
PLLATE | 846 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.