Basic information |
Taxonomy |
Protein Sequence |
Structure visualization |
Binding Residues |
dbCAN domains |
Homology within Cluster
Information for CAZyme ID: AHF91789.1
Basic Information
| GenBank ID | AHF91789.1 |
| Family | GH106 |
| Sequence Length | 1407 |
| UniProt ID | W0J500(100,100) |
| Average pLDDT? | 90.42 |
| CAZy50 ID | 4844 |
| CAZy50 Rep | Yes, AHF91789.1 |
| Structure Cluster | SC_GH106_clus37 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 794903 |
| Kingdom | Bacteria |
| Phylum | Verrucomicrobiota |
| Class | Opitutae |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | |
| Species | Opitutaceae bacterium TAV5 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNTPTLPPWY HAFIFGLLAC LASAAQAQAD ILPFPAVSHR DGLPNVTARI KAGKTVRVAY | 60 |
| LGGSITAASG WRVLTTDFLK REFPAAKIEE IFAAISGTDS AFGACRVKPQ VLDHEPDLLF | 120 |
| VEYAVNDIGM PEERIRTTME GIVRQTWRAN PDADICFVYT VSQTQLADYE AGRDSPTPRA | 180 |
| MDAVADHYGI PSIHLGVEVA HQVTAGKLVA RGSAQGNDAG GRDREGRIVF TADGIHPLPA | 240 |
| GHRLYASVIG PALAEMLKQP APPRPHTLIA PLTGTPWEHA SIGLVERAMR TGAWEQIPAG | 300 |
| SDIRTSWQPP DLTPPLWVAT MAGASATITF EGDTVGLLGM KGPDNGRFRV TVDDLPPVTG | 360 |
| TFFDAFSQEG HYRLSPWWFP RPLKPGPHTL RVELLDAAVE PIDKPGILKK RGYTPKDPSA | 420 |
| FAANNLYLCG FLFRESSVFS APPTVLESGF DAPPASARPL TWWHWISGNV TKEGIAADLA | 480 |
| AMKEAGIAGV QLFDAGIYLP DGPVRYGTDN WHDHVQFALK TAADLGMDFT LMNTPGWSAS | 540 |
| GGPWITPEQS MKRLVRTETD VISTGPGEPV SAMLPMPPVR ENFYRDIVVL AVPDDARIPR | 600 |
| LPGWDQRIKL SSRPVARPAH KNKDSASHAI ARDLILDLSS SMDSGGNFRA SLPAGKWTLL | 660 |
| RFGFTSTGAQ NHPAVPEGHG LECDKLDPGA VAFQFEQSMG RIIRDAGPLV GKTLTGILFD | 720 |
| SFEAGFQNWT DTLPTQFTAL HGYDLVPLLP VLTGRIVESP EFTECVLHDF RVLIDHGFKE | 780 |
| NYFGVMQRLA RERGLITWGE VFGGPLNPSV IAPRVDVLMT EFWHHARFPA RIKLLASIAN | 840 |
| ILDQHILAAE AFSARPEEDG WKAVPSMLKR PGDHAFASGV NRVVLHTYAH QPYDNAAPGF | 900 |
| SLGRYGTRFG RFNTWWPYLR AWTDYIARSQ FLLQQGWKHA DLLLLQNEDI GYAFPTSEIN | 960 |
| RIPSGYDFDI GYPKDLAAMS MRDGVLALPH GPAYRVLVLP GMAWAADINT LRRLDEFVDA | 1020 |
| GLVLFGSPPT TPAGVNDFRR REEFDRLVAR LWAGLDGKSV TQKKVGRGLV VRSASVADAL | 1080 |
| RLANLARDLA WESENLPSNM DSGINFIHRR LKDADVYFVF NHTGEPVADD FVFRTAGRIP | 1140 |
| ELWDAVTGAR VQAAAFSAGE TRTAVPLQLA PYGSTFVVFQ KPPAGQSSRL AAIPSGAEMR | 1200 |
| AGRLYTREAA PGIAFDGPWQ VAFTNRSLGA PESMTFDTLS SWSEHADDAI KHYSGTAVYR | 1260 |
| KTFTLPKSFS ASNGLTAFLD LGRVADIASA RVNGHDAGVL WVAPFRVDIT RLLRPGENTI | 1320 |
| EISVANTWVN RIIGDERIPV PYGYQPKGTS RFTDGRLLEL PAWISNPEGG AKNPRHTFSM | 1380 |
| WKHYDADSPL LPAGLLGPVK IEWLRAL | 1407 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.42 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MNTPTLPPWY HAFIFGLLAC LASAAQAQAD ILPFPAVSHR DGLPNVTARI KAGKTVRVAY | 60 |
| LGGSITAASG WRVLTTDFLK REFPAAKIEE IFAAISGTDS AFGACRVKPQ VLDHEPDLLF | 120 |
| VEYAVNDIGM PEERIRTTME GIVRQTWRAN PDADICFVYT VSQTQLADYE AGRDSPTPRA | 180 |
| MDAVADHYGI PSIHLGVEVA HQVTAGKLVA RGSAQGNDAG GRDREGRIVF TADGIHPLPA | 240 |
| GHRLYASVIG PALAEMLKQP APPRPHTLIA PLTGTPWEHA SIGLVERAMR TGAWEQIPAG | 300 |
| SDIRTSWQPP DLTPPLWVAT MAGASATITF EGDTVGLLGM KGPDNGRFRV TVDDLPPVTG | 360 |
| TFFDAFSQEG HYRLSPWWFP RPLKPGPHTL RVELLDAAVE PIDKPGILKK RGYTPKDPSA | 420 |
| FAANNLYLCG FLFRESSVFS APPTVLESGF DAPPASARPL TWWHWISGNV TKEGIAADLA | 480 |
| AMKEAGIAGV QLFDAGIYLP DGPVRYGTDN WHDHVQFALK TAADLGMDFT LMNTPGWSAS | 540 |
| GGPWITPEQS MKRLVRTETD VISTGPGEPV SAMLPMPPVR ENFYRDIVVL AVPDDARIPR | 600 |
| LPGWDQRIKL SSRPVARPAH KNKDSASHAI ARDLILDLSS SMDSGGNFRA SLPAGKWTLL | 660 |
| RFGFTSTGAQ NHPAVPEGHG LECDKLDPGA VAFQFEQSMG RIIRDAGPLV GKTLTGILFD | 720 |
| SFEAGFQNWT DTLPTQFTAL HGYDLVPLLP VLTGRIVESP EFTECVLHDF RVLIDHGFKE | 780 |
| NYFGVMQRLA RERGLITWGE VFGGPLNPSV IAPRVDVLMT EFWHHARFPA RIKLLASIAN | 840 |
| ILDQHILAAE AFSARPEEDG WKAVPSMLKR PGDHAFASGV NRVVLHTYAH QPYDNAAPGF | 900 |
| SLGRYGTRFG RFNTWWPYLR AWTDYIARSQ FLLQQGWKHA DLLLLQNEDI GYAFPTSEIN | 960 |
| RIPSGYDFDI GYPKDLAAMS MRDGVLALPH GPAYRVLVLP GMAWAADINT LRRLDEFVDA | 1020 |
| GLVLFGSPPT TPAGVNDFRR REEFDRLVAR LWAGLDGKSV TQKKVGRGLV VRSASVADAL | 1080 |
| RLANLARDLA WESENLPSNM DSGINFIHRR LKDADVYFVF NHTGEPVADD FVFRTAGRIP | 1140 |
| ELWDAVTGAR VQAAAFSAGE TRTAVPLQLA PYGSTFVVFQ KPPAGQSSRL AAIPSGAEMR | 1200 |
| AGRLYTREAA PGIAFDGPWQ VAFTNRSLGA PESMTFDTLS SWSEHADDAI KHYSGTAVYR | 1260 |
| KTFTLPKSFS ASNGLTAFLD LGRVADIASA RVNGHDAGVL WVAPFRVDIT RLLRPGENTI | 1320 |
| EISVANTWVN RIIGDERIPV PYGYQPKGTS RFTDGRLLEL PAWISNPEGG AKNPRHTFSM | 1380 |
| WKHYDADSPL LPAGLLGPVK IEWLRAL | 1407 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.