Information for CAZyme ID: AHB40366.1
Basic Information
GenBank ID | AHB40366.1 |
Family | GT51 |
Sequence Length | 906 |
UniProt ID | A0A656PMR8(100,100)![]() |
Average pLDDT? | 85.25 |
CAZy50 ID | 19019 |
CAZy50 Rep | Yes, AHB40366.1 |
Structure Cluster | SC_GT51_clus19 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1394710 |
Kingdom | Bacteria |
Phylum | candidate division WWE3 |
Class | |
Order | |
Family | |
Genus | |
Species | candidate division WWE3 bacterium RAAC2_WWE3_1 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MPVRKTGKYR TYKPKNNFLK KFKLSGIFDF SGVKAVTGFY KKNKPDTVSL AGLGAKKLKT | 60 |
YTVIASAVLT LMVAGLFGTV VVFAYFSREL PNPTQLLERS FELSTRFYDR NDKLIYEVFG | 120 |
DKNRTLVKME DVNPYVTYAT LSTEDAEFYL HQGYSLRGMA RALVNTFTGE GLQGGSTLTQ | 180 |
QVIKNTLLTQ DRTLVRKIKE MILSLQLENR YSKDEIIQMY LNETPYGGQN YGIYSASKAY | 240 |
FNKLPKDLTV AESAYLAGLP QRPSYYSQFG VNPEAGIERK DYVLYLMRER GWIAGDGKRH | 300 |
YLSQEDYDAA RNEELKFETA RVPLEAPHFV FYAKQYLIDI LGEDAVEKGG LKVKTSIDLD | 360 |
LQKVAQETVT NELEESVNLN VWNGAMVVLD PKTGQILAMV GSKGYNLDAQ PEGCISGTSG | 420 |
ENSCKFDPYV NVAVSDRQPG SAIKPITYAN MLAQGYSAAY PLLDMPISFE GSAPDKPYIP | 480 |
ENYDGIFRGV VPLRRALGNS LNIPAVEALK IGGIDNMIDL AEKMGITTFK DRQRYGLALT | 540 |
LGGGETKLLE LAGAYSVFAA GGMFHQPVPI IEVQDSNGKV VYKPQVQGVR ALEEGTAFLI | 600 |
SDILSDNGAR SDVFGTGSLL NIPGHTVAVK TGTTDDKRDN YAIGYTPSVV VGVWVGNSNN | 660 |
EKMNPYIASG ITGASPIWNS FVKEYLKDKT DEKFKAPSNV EKFEVDKLTG GLPFEGFDTR | 720 |
NEWFIKGTEP TAKSDWFQRL EVCKIDGRIA NEGCKDAGET DEISFVRVTA PYSEWQPAVD | 780 |
AWVKEKYKED DRFFPPLMQS KLEFDGDEVS NKDDVNVEIV GVKEGQNVPL NFRLNVEVSA | 840 |
YNDIKIVRIY MDGDKVAEDD ASPYGYNFEL DASKIGSHEF EATVTDDDDN KGSAKIRLNV | 900 |
VGYARQ | 906 |
Predicted 3D structure by AlphaFold2 with pLDDT = 85.25 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MPVRKTGKYR TYKPKNNFLK KFKLSGIFDF SGVKAVTGFY KKNKPDTVSL AGLGAKKLKT | 60 |
YTVIASAVLT LMVAGLFGTV VVFAYFSREL PNPTQLLERS FELSTRFYDR NDKLIYEVFG | 120 |
DKNRTLVKME DVNPYVTYAT LSTEDAEFYL HQGYSLRGMA RALVNTFTGE GLQGGSTLTQ | 180 |
QVIKNTLLTQ DRTLVRKIKE MILSLQLENR YSKDEIIQMY LNETPYGGQN YGIYSASKAY | 240 |
FNKLPKDLTV AESAYLAGLP QRPSYYSQFG VNPEAGIERK DYVLYLMRER GWIAGDGKRH | 300 |
YLSQEDYDAA RNEELKFETA RVPLEAPHFV FYAKQYLIDI LGEDAVEKGG LKVKTSIDLD | 360 |
LQKVAQETVT NELEESVNLN VWNGAMVVLD PKTGQILAMV GSKGYNLDAQ PEGCISGTSG | 420 |
ENSCKFDPYV NVAVSDRQPG SAIKPITYAN MLAQGYSAAY PLLDMPISFE GSAPDKPYIP | 480 |
ENYDGIFRGV VPLRRALGNS LNIPAVEALK IGGIDNMIDL AEKMGITTFK DRQRYGLALT | 540 |
LGGGETKLLE LAGAYSVFAA GGMFHQPVPI IEVQDSNGKV VYKPQVQGVR ALEEGTAFLI | 600 |
SDILSDNGAR SDVFGTGSLL NIPGHTVAVK TGTTDDKRDN YAIGYTPSVV VGVWVGNSNN | 660 |
EKMNPYIASG ITGASPIWNS FVKEYLKDKT DEKFKAPSNV EKFEVDKLTG GLPFEGFDTR | 720 |
NEWFIKGTEP TAKSDWFQRL EVCKIDGRIA NEGCKDAGET DEISFVRVTA PYSEWQPAVD | 780 |
AWVKEKYKED DRFFPPLMQS KLEFDGDEVS NKDDVNVEIV GVKEGQNVPL NFRLNVEVSA | 840 |
YNDIKIVRIY MDGDKVAEDD ASPYGYNFEL DASKIGSHEF EATVTDDDDN KGSAKIRLNV | 900 |
VGYARQ | 906 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.