Information for CAZyme ID: AHB32800.2
Basic Information
GenBank ID | AHB32800.2 |
Family | GT52 |
Sequence Length | 317 |
UniProt ID | V5RDI3(100,100)![]() |
Average pLDDT? | 87.71 |
CAZy50 ID | 148294 |
CAZy50 Rep | Yes, AHB32800.2 |
Structure Cluster | SC_GT52_clus8 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 470 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Moraxellales |
Family | Moraxellaceae |
Genus | Acinetobacter |
Species | Acinetobacter baumannii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MQKNLIVCMT PLQAMIAEKI ISNSKEKFDI IYIADLTDKN KNYFLRLLNI CNEGIFIEHP | 60 |
KNLIEFLKFK VKIIKIRNFK YKSVYAANID RKIIQYLYSL NLKANIYTFD DGVGNIIPKS | 120 |
SFNVEEDISI GKKIFWRLLG VKVNSYFIKE HSKTHYTIFN NIKNIIDKVE YVQLVPNLYI | 180 |
EDNEEKDSIK IFLGQPMTEI NDKYNNIFIS NLLEKFQINL YFPHPREKDV KLNIDIIESP | 240 |
KVFEEYVIDL MRDSQCKVEI YSFLSTAIIN ISQINNIEVK YICDYYLMEK YKEFYKIAQD | 300 |
YFNIKVINFE NELNEVG | 317 |
Predicted 3D structure by AlphaFold2 with pLDDT = 87.71 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MQKNLIVCMT PLQAMIAEKI ISNSKEKFDI IYIADLTDKN KNYFLRLLNI CNEGIFIEHP | 60 |
KNLIEFLKFK VKIIKIRNFK YKSVYAANID RKIIQYLYSL NLKANIYTFD DGVGNIIPKS | 120 |
SFNVEEDISI GKKIFWRLLG VKVNSYFIKE HSKTHYTIFN NIKNIIDKVE YVQLVPNLYI | 180 |
EDNEEKDSIK IFLGQPMTEI NDKYNNIFIS NLLEKFQINL YFPHPREKDV KLNIDIIESP | 240 |
KVFEEYVIDL MRDSQCKVEI YSFLSTAIIN ISQINNIEVK YICDYYLMEK YKEFYKIAQD | 300 |
YFNIKVINFE NELNEVG | 317 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.