Information for CAZyme ID: AGS52433.1
Basic Information
GenBank ID | AGS52433.1 |
Family | GH5_4 |
Sequence Length | 742 |
UniProt ID | A0A806JZW4(100,100)![]() |
Average pLDDT? | 84.24 |
CAZy50 ID | 33634 |
CAZy50 Rep | Yes, AGS52433.1 |
Structure Cluster | SC_GH5_clus68 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1181567 |
Kingdom | Bacteria |
Phylum | |
Class | |
Order | |
Family | |
Genus | |
Species | uncultured bacterium contig00100 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKKLVKEFCI IAIILAIGFS LTVCDTQDTG NSGKNNDTPS PTVTEVIVSP SPAAVVKGED | 60 |
IAFNAVVTGT NNPSQGVTWS IDPSTPAKNS GTNISAAGVL TVAAEETLPS LTVRATSYED | 120 |
TLKSGTSTVT IHSDSQTVPT VSTVTVSPST AIVEKGGKQT FTATVTGTNN PAGTVTWSIT | 180 |
QTGKNEGTVI SSGGELTVAA GETLATLTVR ATSTVNTGKY GEAAVTVKEP STPTGFNMTA | 240 |
AELVAGMRLG WNLGNTLDAH GGGTVTQMET AWGNPVTTQA NIDTLKNRGF NIIRIPVSWS | 300 |
RAVDANYNIR TDFMARVKEI VDYAVNNDMY ILLNTHHDED IFKFTPSEKT ASIAAFNKIW | 360 |
TQIADAFKNY GEKLIFEGLN EPRTIGSSAE WNGGTAEERA ILNEHYVNFV NVVRASGGNN | 420 |
NKRFLLINTY GGSGTAAAIN GLVLPADTAQ NKIIVSFHNY APYDFALNTN TDPSEGSVAV | 480 |
STWNKNNSSD TSPISTPINN AYNKFAANGI PVIIGEFGAM NRNNESVRAQ WAEYYVGYAA | 540 |
EKGMPCVWWD NGVTSGNGEL FGLLNRNNNT WSYPLLVEAL VTAAGSSGSG ENVEEPAPPT | 600 |
VTGNMGSYVF GTQDGSEEPN YRLAIWELSS ENVAIAKTAG AKVVLQLTSA PSAGMQFVWQ | 660 |
GPATNSWWNS QDILGDNGSP LNSSVTWNTS AKTLTINLNA NTVANYSAGD NPFTAQSQLR | 720 |
LLIQYFGGSG VNDLGITSAN LQ | 742 |
Predicted 3D structure by AlphaFold2 with pLDDT = 84.24 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKKLVKEFCI IAIILAIGFS LTVCDTQDTG NSGKNNDTPS PTVTEVIVSP SPAAVVKGED | 60 |
IAFNAVVTGT NNPSQGVTWS IDPSTPAKNS GTNISAAGVL TVAAEETLPS LTVRATSYED | 120 |
TLKSGTSTVT IHSDSQTVPT VSTVTVSPST AIVEKGGKQT FTATVTGTNN PAGTVTWSIT | 180 |
QTGKNEGTVI SSGGELTVAA GETLATLTVR ATSTVNTGKY GEAAVTVKEP STPTGFNMTA | 240 |
AELVAGMRLG WNLGNTLDAH GGGTVTQMET AWGNPVTTQA NIDTLKNRGF NIIRIPVSWS | 300 |
RAVDANYNIR TDFMARVKEI VDYAVNNDMY ILLNTHHDED IFKFTPSEKT ASIAAFNKIW | 360 |
TQIADAFKNY GEKLIFEGLN EPRTIGSSAE WNGGTAEERA ILNEHYVNFV NVVRASGGNN | 420 |
NKRFLLINTY GGSGTAAAIN GLVLPADTAQ NKIIVSFHNY APYDFALNTN TDPSEGSVAV | 480 |
STWNKNNSSD TSPISTPINN AYNKFAANGI PVIIGEFGAM NRNNESVRAQ WAEYYVGYAA | 540 |
EKGMPCVWWD NGVTSGNGEL FGLLNRNNNT WSYPLLVEAL VTAAGSSGSG ENVEEPAPPT | 600 |
VTGNMGSYVF GTQDGSEEPN YRLAIWELSS ENVAIAKTAG AKVVLQLTSA PSAGMQFVWQ | 660 |
GPATNSWWNS QDILGDNGSP LNSSVTWNTS AKTLTINLNA NTVANYSAGD NPFTAQSQLR | 720 |
LLIQYFGGSG VNDLGITSAN LQ | 742 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.