Information for CAZyme ID: AGB28636.1
Basic Information
GenBank ID | AGB28636.1 |
Family | GH2 |
Sequence Length | 799 |
UniProt ID | F9D2V9(100,100)![]() |
Average pLDDT? | 93.17 |
CAZy50 ID | 26635 |
CAZy50 Rep | No, QGA23305.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 908937 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Bacteroidia |
Order | Bacteroidales |
Family | Prevotellaceae |
Genus | Prevotella |
Species | Prevotella dentalis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRLSGLLFLW LLLAFPKTVT EACGQVITLN GEWQLSYWKQ PAAPVRSPEG MQRMAAKSIP | 60 |
ATVPGNVELD LLRAGLIKDP MIGNHVNELR QWEGYEWCFN RRFITPQLRG DQRVNLSLLG | 120 |
VDCLADIWLN SRHIGSVANM MIEHAFDITD VLNRDGTDNT LQIIIRSATL EGQNRLLGTF | 180 |
SIGGFASEES AYIRKAPHTF GWDILPRLVS AGLWRNVELR VVQPVRFRNV HYYVSQIDTA | 240 |
SRHVQLFADV QVAMPMEQFD HVRARLSLSR HGKVAYTLEQ PVVTPAFRCQ WSLEHADLWW | 300 |
PRGYGEPALY DVKAELVDEK GRVLASDRQR LGLRTVCLDL NDMHSDSSPG RFRFFVNDEP | 360 |
VFIHGTNWVP LDALHSRDTM HVDKMMDMVA DLNINMIRCW GGNVYEDHHF FDRCDELGVL | 420 |
VWQDFAMGCN FYPQRDDFAR AVEEEVQSVV VKLRNHPSLA LWSGNNENDM IAYQTLRNFH | 480 |
FDPNRDRISR EVIPRVLYEF DLTRPYLPSS PYYSEAVYRH GGGDSLLPEN HLWGPRGYYK | 540 |
DAFYRNATAV FCSEIGYHGC PCVESLQQMF SKDCVYPWTR DFEWNDEWVT KSVRRFPVWG | 600 |
KTYNRNNLML NQIRCVFGDV PRKLDDFVYA SQSVQAEAMK YFLEMWRGRK FDDKSGIIWW | 660 |
NLRDGWPLLS DAIVDYYFRK KRAYDYLRHA ERDICLFVND AASGSLALMA VNDTRSEVRG | 720 |
EVTVSDVESG KHVFQGRFHI PRNGKALVTT LPEPHGQGVY LIRYAVGGRT YGNHFLYGKP | 780 |
PYVLSDYRRW MEKSRLYGQ | 799 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.17 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(21-737)
MRLSGLLFLW LLLAFPKTVT EACGQVITLN GEWQLSYWKQ PAAPVRSPEG MQRMAAKSIP | 60 |
ATVPGNVELD LLRAGLIKDP MIGNHVNELR QWEGYEWCFN RRFITPQLRG DQRVNLSLLG | 120 |
VDCLADIWLN SRHIGSVANM MIEHAFDITD VLNRDGTDNT LQIIIRSATL EGQNRLLGTF | 180 |
SIGGFASEES AYIRKAPHTF GWDILPRLVS AGLWRNVELR VVQPVRFRNV HYYVSQIDTA | 240 |
SRHVQLFADV QVAMPMEQFD HVRARLSLSR HGKVAYTLEQ PVVTPAFRCQ WSLEHADLWW | 300 |
PRGYGEPALY DVKAELVDEK GRVLASDRQR LGLRTVCLDL NDMHSDSSPG RFRFFVNDEP | 360 |
VFIHGTNWVP LDALHSRDTM HVDKMMDMVA DLNINMIRCW GGNVYEDHHF FDRCDELGVL | 420 |
VWQDFAMGCN FYPQRDDFAR AVEEEVQSVV VKLRNHPSLA LWSGNNENDM IAYQTLRNFH | 480 |
FDPNRDRISR EVIPRVLYEF DLTRPYLPSS PYYSEAVYRH GGGDSLLPEN HLWGPRGYYK | 540 |
DAFYRNATAV FCSEIGYHGC PCVESLQQMF SKDCVYPWTR DFEWNDEWVT KSVRRFPVWG | 600 |
KTYNRNNLML NQIRCVFGDV PRKLDDFVYA SQSVQAEAMK YFLEMWRGRK FDDKSGIIWW | 660 |
NLRDGWPLLS DAIVDYYFRK KRAYDYLRHA ERDICLFVND AASGSLALMA VNDTRSEVRG | 720 |
EVTVSDVESG KHVFQGRFHI PRNGKALVTT LPEPHGQGVY LIRYAVGGRT YGNHFLYGKP | 780 |
PYVLSDYRRW MEKSRLYGQ | 799 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.