Information for CAZyme ID: AFH60867.1
Basic Information
GenBank ID | AFH60867.1 |
Family | CBM30 |
Sequence Length | 1265 |
UniProt ID | I0BES0(100,100)![]() |
Average pLDDT? | 66.45 |
CAZy50 ID | 6677 |
CAZy50 Rep | Yes, AFH60867.1 |
Structure Cluster | SC_CBM30_clus4 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 997761 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus mucilaginosus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNATASSRVK RFTYMIKLLL CTAIVLAGAV PLSVSASAQP LPDLVFFGEN PNTSHWGAEV | 60 |
QKENDLLPFD ASVAFNGHPA HRVTNVSGGW WGIGMTLQWT TRDISGYIPY GALEFELKGS | 120 |
RGGELLQFSL SDGRSPAAET GTVPAAASPS WNHVTIPLAQ FPQIGSFPAS AWNTLLITKV | 180 |
NGEDLNTLWL SDMKFTSRYI TRYEPLNMTA PQGTVPAMPS VVTAVYSDST TTEVPVTWSG | 240 |
VPDGSAAGAF TVQGHVAGVS VQPTAEVTVG TEADQGTGSE EPQPAQETPP AVETPSPETV | 300 |
PSSGQQEHVV FEGGRTDQYF GSGGSLKLET DLVSTSSLPV DSTVEGTYNG QPSYKIAVTK | 360 |
LADPNWGYWN GVLAADGWTS YSLEAFREGT LEFYVKGAAG GEDFVIGIMD TNDVKSVLSL | 420 |
SGLAQTVTTD WSLIRIPLSR FTEQAPDLEL SIIDKVVLEN ASTQGEMSVW LNRIKFTQNP | 480 |
AAELEIASVD PVKAVTVAGL PPELPQEVPV TYENGTTGTA SVSWEESDGY RIRGRYTVRG | 540 |
TILQDTGPVP VTAEVTVVRA LSDEPHVIFL DKKKAQWASA EGHFSLGMEQ ALDDQGMPVT | 600 |
NEQGNPVMTL PVDPQVTFGG LPAYRLQVTR IPGPNWGYWG TGLTMDNWNP VNLEALYERG | 660 |
SLDFMIKGLT GGESFSVVLT DRAGALGTVK LSDVAAVTTG WRQVSIPLKR LVPVSSAHRL | 720 |
KESTAVTLTS DTGTGAAPLT VWLSDMRFTS EASREVVRFG TKLTVPASQL PQLPVLPATA | 780 |
EAVYNDGTAE QVPVAWDAVT FSSWGYPNPV QGTAQGIDLP ATLQFTVEGS RSSGSSGSGS | 840 |
GSGSAGMPEE PEAPIAVPVV PAASSLYPNG AAGTYTLPAL KPAVDPADAL LAVVNVQPGA | 900 |
LKEGYKAAAP GPGQRPVMHI KVPYMSGVTG YAVKLPAGAV SGAYPDAELS VTTDLGRVVL | 960 |
PADLLNPDQL NGAAAIRLVI RRSDTADMKK TAREQVGGRT VLDIHLEADG VILPWESREK | 1020 |
RVLVSPDYAP TDEELEHPER LVILYLGEDG EAEPVPSGRY DRTGGRMIFS AGHFSRYAVA | 1080 |
WGSRTFGDLA GYGWAQEAVE LLASRGIVQG TGPAEFAPGR GVTRAEFVSL LVRTLDLAGL | 1140 |
PAEADFRDVD PSSPHYQAIA AAARLGIAGG IGGGLFAPDA PVSRQDVIVL TERALERAGR | 1200 |
LHAGAADSLP SGVFRDAEDL AGYAVPAVSA LYGAGLIEGA GGLLRPEAEM SRAEAAVLLN | 1260 |
RIYPY | 1265 |
Predicted 3D structure by AlphaFold2 with pLDDT = 66.45 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MNATASSRVK RFTYMIKLLL CTAIVLAGAV PLSVSASAQP LPDLVFFGEN PNTSHWGAEV | 60 |
QKENDLLPFD ASVAFNGHPA HRVTNVSGGW WGIGMTLQWT TRDISGYIPY GALEFELKGS | 120 |
RGGELLQFSL SDGRSPAAET GTVPAAASPS WNHVTIPLAQ FPQIGSFPAS AWNTLLITKV | 180 |
NGEDLNTLWL SDMKFTSRYI TRYEPLNMTA PQGTVPAMPS VVTAVYSDST TTEVPVTWSG | 240 |
VPDGSAAGAF TVQGHVAGVS VQPTAEVTVG TEADQGTGSE EPQPAQETPP AVETPSPETV | 300 |
PSSGQQEHVV FEGGRTDQYF GSGGSLKLET DLVSTSSLPV DSTVEGTYNG QPSYKIAVTK | 360 |
LADPNWGYWN GVLAADGWTS YSLEAFREGT LEFYVKGAAG GEDFVIGIMD TNDVKSVLSL | 420 |
SGLAQTVTTD WSLIRIPLSR FTEQAPDLEL SIIDKVVLEN ASTQGEMSVW LNRIKFTQNP | 480 |
AAELEIASVD PVKAVTVAGL PPELPQEVPV TYENGTTGTA SVSWEESDGY RIRGRYTVRG | 540 |
TILQDTGPVP VTAEVTVVRA LSDEPHVIFL DKKKAQWASA EGHFSLGMEQ ALDDQGMPVT | 600 |
NEQGNPVMTL PVDPQVTFGG LPAYRLQVTR IPGPNWGYWG TGLTMDNWNP VNLEALYERG | 660 |
SLDFMIKGLT GGESFSVVLT DRAGALGTVK LSDVAAVTTG WRQVSIPLKR LVPVSSAHRL | 720 |
KESTAVTLTS DTGTGAAPLT VWLSDMRFTS EASREVVRFG TKLTVPASQL PQLPVLPATA | 780 |
EAVYNDGTAE QVPVAWDAVT FSSWGYPNPV QGTAQGIDLP ATLQFTVEGS RSSGSSGSGS | 840 |
GSGSAGMPEE PEAPIAVPVV PAASSLYPNG AAGTYTLPAL KPAVDPADAL LAVVNVQPGA | 900 |
LKEGYKAAAP GPGQRPVMHI KVPYMSGVTG YAVKLPAGAV SGAYPDAELS VTTDLGRVVL | 960 |
PADLLNPDQL NGAAAIRLVI RRSDTADMKK TAREQVGGRT VLDIHLEADG VILPWESREK | 1020 |
RVLVSPDYAP TDEELEHPER LVILYLGEDG EAEPVPSGRY DRTGGRMIFS AGHFSRYAVA | 1080 |
WGSRTFGDLA GYGWAQEAVE LLASRGIVQG TGPAEFAPGR GVTRAEFVSL LVRTLDLAGL | 1140 |
PAEADFRDVD PSSPHYQAIA AAARLGIAGG IGGGLFAPDA PVSRQDVIVL TERALERAGR | 1200 |
LHAGAADSLP SGVFRDAEDL AGYAVPAVSA LYGAGLIEGA GGLLRPEAEM SRAEAAVLLN | 1260 |
RIYPY | 1265 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.