Information for CAZyme ID: AFC28690.1
Basic Information
GenBank ID | AFC28690.1 |
Family | CBM30 |
Sequence Length | 1265 |
UniProt ID | H6NH12(100,100)![]() |
Average pLDDT? | 64.11 |
CAZy50 ID | 6677 |
CAZy50 Rep | No, AFH60867.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1116391 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Bacillales |
Family | Paenibacillaceae |
Genus | Paenibacillus |
Species | Paenibacillus mucilaginosus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MNSTASSRVK RFTYMIKLLL CTAIVLAGAV PLSLSASAQP LPDLVFFGEN PNTSHWGVEV | 60 |
QKENDLLPFD ASVAFNGHPA HRVTNVSGGW WGIGMTLQWT TRDISGYIPY GALEFELKGS | 120 |
RGGELLQFSL SDGRSPAAET GSVPAEASAS WNHVTIPLAQ FPQIGSFPAS AWNTLLITKV | 180 |
NGEDLNTLWL SDMKFTSRYI TGYEPLILTA PQGTVPAMPS VVTAVYSDST TTEVPVTWSG | 240 |
VPDGSAAGAF TVQGHVAGVS VQPTAEVTVG TEADQGTGSE EPQPAQETPP AVETPSPETV | 300 |
PSSGQQEHVV FEGVRTDQYF GSGGNLKLET DLVSTSSLPV DSTVEGTYNG QPSYKIAVTK | 360 |
LADPNWGYWN GVLAADGWTS YSLEAFREGT LEFYVKGAAG GEDFVIGIMD TNDVKSVLSL | 420 |
SGLAQTVTTD WSLIRIPLSR FTEQAPDLDL SIIDKVVLEN ASTQGEMSVW LNRIKFTQNP | 480 |
AAELEIASVD PVKAVTVAGL PPELPQEVPV TYENGTTGTA NVSWEAGDGY RVRGRYTVRG | 540 |
TILQDTGPVP VTAEVTVVRA LSDEPHVIFL DKKKAQWASA EGHFSLGMEQ ALDDQGMPVT | 600 |
NEQGNPVMTL PVDPQVTFGG LPAYRLQVTR IPGPNWGYWG TGLTMDNWNP VNLEALYERG | 660 |
SLDFMIKGLA GGESFSVVLT DRAGALGTVK LSDVAAVTTG WRQVSIPLKR LVPVSSAHRL | 720 |
KESTAVTFTS DTGTGAAPLT VWLSDVRLAS EASREVVRFG TKLPVQAQQL PQLPELPATA | 780 |
EAVYNDGTTE QVPVAWDAVT FSSWGYPNPV QGTAQGIDLP ATLQFTVEGS RSSGSSGSGS | 840 |
GSGSAGMPEE PEAPIAAPVV PAASSLYPNG AAGTYTLPAL KPAVDPADAL LAVVNVQPGA | 900 |
LKEGYKAAAP GPGQRPVMHI KVPYMSGVTG YAVKLPAGAV SGAYPDAELS VTTDLGRVVL | 960 |
PADLLNPDQL NGAAAIRLVI RRSDTADMKK TAREQVGGRT VLDIHLEADG VILPWESREK | 1020 |
RVLVSPDYAP TDEELEHPER LVILYLGEDG EAEPVPSGRY DRTGGRMIFS AGHFSRYAVA | 1080 |
WGSRTFGDLA GYGWAQEAVE LLASRGIVQG TGPAEFAPGR GVTRAEFVSL LVRTLDLAGL | 1140 |
PAEADFRDVD PSSPHYQAIA AAARLGIAGG IGGGLFAPDA PVSRQDVIVL TERALERAGR | 1200 |
LHAGAADSLP SGVFRDAEDL AGYAVPAVSA LYGAGLIEGA GGLLRPEAEM SRAEAAVLLN | 1260 |
RIYPY | 1265 |
Predicted 3D structure by AlphaFold2 with pLDDT = 64.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM30(67-197)+CBM30(338-479)+CBM30(609-756)+SLH(1146-1186)
MNSTASSRVK RFTYMIKLLL CTAIVLAGAV PLSLSASAQP LPDLVFFGEN PNTSHWGVEV | 60 |
QKENDLLPFD ASVAFNGHPA HRVTNVSGGW WGIGMTLQWT TRDISGYIPY GALEFELKGS | 120 |
RGGELLQFSL SDGRSPAAET GSVPAEASAS WNHVTIPLAQ FPQIGSFPAS AWNTLLITKV | 180 |
NGEDLNTLWL SDMKFTSRYI TGYEPLILTA PQGTVPAMPS VVTAVYSDST TTEVPVTWSG | 240 |
VPDGSAAGAF TVQGHVAGVS VQPTAEVTVG TEADQGTGSE EPQPAQETPP AVETPSPETV | 300 |
PSSGQQEHVV FEGVRTDQYF GSGGNLKLET DLVSTSSLPV DSTVEGTYNG QPSYKIAVTK | 360 |
LADPNWGYWN GVLAADGWTS YSLEAFREGT LEFYVKGAAG GEDFVIGIMD TNDVKSVLSL | 420 |
SGLAQTVTTD WSLIRIPLSR FTEQAPDLDL SIIDKVVLEN ASTQGEMSVW LNRIKFTQNP | 480 |
AAELEIASVD PVKAVTVAGL PPELPQEVPV TYENGTTGTA NVSWEAGDGY RVRGRYTVRG | 540 |
TILQDTGPVP VTAEVTVVRA LSDEPHVIFL DKKKAQWASA EGHFSLGMEQ ALDDQGMPVT | 600 |
NEQGNPVMTL PVDPQVTFGG LPAYRLQVTR IPGPNWGYWG TGLTMDNWNP VNLEALYERG | 660 |
SLDFMIKGLA GGESFSVVLT DRAGALGTVK LSDVAAVTTG WRQVSIPLKR LVPVSSAHRL | 720 |
KESTAVTFTS DTGTGAAPLT VWLSDVRLAS EASREVVRFG TKLPVQAQQL PQLPELPATA | 780 |
EAVYNDGTTE QVPVAWDAVT FSSWGYPNPV QGTAQGIDLP ATLQFTVEGS RSSGSSGSGS | 840 |
GSGSAGMPEE PEAPIAAPVV PAASSLYPNG AAGTYTLPAL KPAVDPADAL LAVVNVQPGA | 900 |
LKEGYKAAAP GPGQRPVMHI KVPYMSGVTG YAVKLPAGAV SGAYPDAELS VTTDLGRVVL | 960 |
PADLLNPDQL NGAAAIRLVI RRSDTADMKK TAREQVGGRT VLDIHLEADG VILPWESREK | 1020 |
RVLVSPDYAP TDEELEHPER LVILYLGEDG EAEPVPSGRY DRTGGRMIFS AGHFSRYAVA | 1080 |
WGSRTFGDLA GYGWAQEAVE LLASRGIVQG TGPAEFAPGR GVTRAEFVSL LVRTLDLAGL | 1140 |
PAEADFRDVD PSSPHYQAIA AAARLGIAGG IGGGLFAPDA PVSRQDVIVL TERALERAGR | 1200 |
LHAGAADSLP SGVFRDAEDL AGYAVPAVSA LYGAGLIEGA GGLLRPEAEM SRAEAAVLLN | 1260 |
RIYPY | 1265 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.