CAZyme3D

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Entry ID

Information for CAZyme ID: AER96245.1

Basic Information

GenBank IDAER96245.1
FamilyGT31, GT7
Sequence Length788
UniProt IDM1EG48(100,100)Download
Average pLDDT?70.84
CAZy50 ID28574
CAZy50 RepYes, AER96245.1
Structure ClusterSC_GT31_clus80, SC_GT7_clus78
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID9669
KingdomEukaryota
PhylumChordata
ClassMammalia
OrderCarnivora
FamilyMustelidae
GenusMustela
SpeciesMustela putorius

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRASLLLSVL  RPAGPVAVGI  SLGFTLSLLS  VTWVEEPCGP  GPPQPGDSEL  PPRGNTNAAR60
RPNSVQPGAE  RERPGAGAGA  GENWEPRVLP  YHPAQPGQAA  KKAVRTRYIS  TELGIRQRRR120
VALVAVLTSQ  ATLPTLGVAV  NRTLGHRLER  VVFLTGSRGR  RAPPGMAVVT  LGEERPIGHL180
HLALRHLLEQ  HGDDFDWFFI  VPDATYTEAH  GLARLAGRLS  LAAAAHLYLG  RPQDFIGGEP240
APGRYCHGGF  GVLLSRTLLH  QLRPHLESCR  NDIVSARPDE  WLGRCILDAT  GVGCTGDHEG300
VHYNFLELSP  GEPVQEGDPR  FRSALTAHPV  HDPIHMYQLH  KAFARAELER  TYQEIQELQV360
WPGGRSRTLA  IWQPMGSGQL  PGLWVSLHHP  ARPPALRCCA  GTTSQSSMLS  PVLMVRPAAR420
CEVPTRPMWL  TFWGQPWKSS  IVATIQPCGS  RSNSWLMAKQ  LVNGYRRFDP  ARGMEYTLDL480
QLEALTPQGG  RRPLTRRVQL  LRPLSRVEIL  PVPYVTEASR  LTVLLPLAAA  ERDLAPAFLE540
AFAAAALEPG  DAAAALTLLL  LYEPRQAQRA  AHADVFAPVK  AHVAELERRF  PGARVPWLSV600
QTAAPSPLRL  MDLLSKKHPL  DTLFLLAGPD  TVLTPDFLNR  CRMHAISGWQ  AFFPMHFQAF660
HPAVAPPQGP  GPPELGRDTG  RFDRQAASEA  CFYNSDYVAA  RGRLAAASEQ  EEELLESLDV720
YELFLRFSSL  HVLRAVEPAL  LQRYRAQTCS  ARLSEDLYHR  CRQSELEGLG  SRTQLAMLLF780
EQEQGNST788

Predicted 3D structure by AlphaFold2 with pLDDT = 70.84 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MRASLLLSVL  RPAGPVAVGI  SLGFTLSLLS  VTWVEEPCGP  GPPQPGDSEL  PPRGNTNAAR60
RPNSVQPGAE  RERPGAGAGA  GENWEPRVLP  YHPAQPGQAA  KKAVRTRYIS  TELGIRQRRR120
VALVAVLTSQ  ATLPTLGVAV  NRTLGHRLER  VVFLTGSRGR  RAPPGMAVVT  LGEERPIGHL180
HLALRHLLEQ  HGDDFDWFFI  VPDATYTEAH  GLARLAGRLS  LAAAAHLYLG  RPQDFIGGEP240
APGRYCHGGF  GVLLSRTLLH  QLRPHLESCR  NDIVSARPDE  WLGRCILDAT  GVGCTGDHEG300
VHYNFLELSP  GEPVQEGDPR  FRSALTAHPV  HDPIHMYQLH  KAFARAELER  TYQEIQELQV360
WPGGRSRTLA  IWQPMGSGQL  PGLWVSLHHP  ARPPALRCCA  GTTSQSSMLS  PVLMVRPAAR420
CEVPTRPMWL  TFWGQPWKSS  IVATIQPCGS  RSNSWLMAKQ  LVNGYRRFDP  ARGMEYTLDL480
QLEALTPQGG  RRPLTRRVQL  LRPLSRVEIL  PVPYVTEASR  LTVLLPLAAA  ERDLAPAFLE540
AFAAAALEPG  DAAAALTLLL  LYEPRQAQRA  AHADVFAPVK  AHVAELERRF  PGARVPWLSV600
QTAAPSPLRL  MDLLSKKHPL  DTLFLLAGPD  TVLTPDFLNR  CRMHAISGWQ  AFFPMHFQAF660
HPAVAPPQGP  GPPELGRDTG  RFDRQAASEA  CFYNSDYVAA  RGRLAAASEQ  EEELLESLDV720
YELFLRFSSL  HVLRAVEPAL  LQRYRAQTCS  ARLSEDLYHR  CRQSELEGLG  SRTQLAMLLF780
EQEQGNST788

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MRASLLLSVL  RPAGPVAVGI  SLGFTLSLLS  VTWVEEPCGP  GPPQPGDSEL  PPRGNTNAAR60
RPNSVQPGAE  RERPGAGAGA  GENWEPRVLP  YHPAQPGQAA  KKAVRTRYIS  TELGIRQRRR120
VALVAVLTSQ  ATLPTLGVAV  NRTLGHRLER  VVFLTGSRGR  RAPPGMAVVT  LGEERPIGHL180
HLALRHLLEQ  HGDDFDWFFI  VPDATYTEAH  GLARLAGRLS  LAAAAHLYLG  RPQDFIGGEP240
APGRYCHGGF  GVLLSRTLLH  QLRPHLESCR  NDIVSARPDE  WLGRCILDAT  GVGCTGDHEG300
VHYNFLELSP  GEPVQEGDPR  FRSALTAHPV  HDPIHMYQLH  KAFARAELER  TYQEIQELQV360
WPGGRSRTLA  IWQPMGSGQL  PGLWVSLHHP  ARPPALRCCA  GTTSQSSMLS  PVLMVRPAAR420
CEVPTRPMWL  TFWGQPWKSS  IVATIQPCGS  RSNSWLMAKQ  LVNGYRRFDP  ARGMEYTLDL480
QLEALTPQGG  RRPLTRRVQL  LRPLSRVEIL  PVPYVTEASR  LTVLLPLAAA  ERDLAPAFLE540
AFAAAALEPG  DAAAALTLLL  LYEPRQAQRA  AHADVFAPVK  AHVAELERRF  PGARVPWLSV600
QTAAPSPLRL  MDLLSKKHPL  DTLFLLAGPD  TVLTPDFLNR  CRMHAISGWQ  AFFPMHFQAF660
HPAVAPPQGP  GPPELGRDTG  RFDRQAASEA  CFYNSDYVAA  RGRLAAASEQ  EEELLESLDV720
YELFLRFSSL  HVLRAVEPAL  LQRYRAQTCS  ARLSEDLYHR  CRQSELEGLG  SRTQLAMLLF780
EQEQGNST788

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help