Information for CAZyme ID: ADV42056.1
Basic Information
GenBank ID | ADV42056.1 |
Family | GH2 |
Sequence Length | 1048 |
UniProt ID | E6SR52(100,100)![]() |
Average pLDDT? | 94.37 |
CAZy50 ID | 12291 |
CAZy50 Rep | Yes, ADV42056.1 |
Structure Cluster | SC_GH2_clus84 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 693979 |
Kingdom | Bacteria |
Phylum | Bacteroidota |
Class | Bacteroidia |
Order | Bacteroidales |
Family | Bacteroidaceae |
Genus | Bacteroides |
Species | Bacteroides helcogenes |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRKGVVCRHK EFIKFSSMNK HFITGLFTVM ALTANAQSFN EWRDSEVNAV NRAPMHTNYF | 60 |
AYESVDAASR GVKEQSSNFM TLNGTWKFFW VKDADARPVD FWKQGFNDKG WSNMPVPGVW | 120 |
ELNGFGDPIY VNVGYAWRNQ FKNNPPQVPV ENNHVGSYRR EIVVPADWKD KDIVAHFGSV | 180 |
TSNMYLWVNG RYVGYSEDSK LEAEFDLTPY LKPGQKNLIA FQVFRWCDGT YLEDQDFFRY | 240 |
SGVGRNCYLY ARDKKRIEDI RVIPDLDADY KDGSLRVTLN LKGSGNVGME LLDATGKQVA | 300 |
AETMHGSGTV VMNVENPHKW TAETPYLYTL RAILQGSGEV IPVKVGFRKI ELKDSQILVN | 360 |
GQPVLFKGAD RHEMDPDGGY VVSPERMMQD IQIMKQFNLN AVRTCHYPDD NLWYDLCDKY | 420 |
GIYVVAEANV ESHGMGYGDK TLAKNPAYKK AHLERNRRNV QRGFNHPSII FWSLGNEAGY | 480 |
GANFEAAYDW VKAEDPSRAV QYEQAGRKGK TDIFCPMYYS YDACRKYCED ASADKPLIQC | 540 |
EYAHAMGNSE GGFKEYWDLV RKYPKYQGGF IWDFVDQSVR WTGKNGKMIY AYGGDFNRFD | 600 |
ASDGNFCDNG LISPDRVPNP HMYEVGRIYQ NIWTTPSDLK NGEINVFNEY FFRDLSAYYL | 660 |
EWEVLKGGKV IRTGRVDDLN IAPRQTSKIK LDLGKICQCE EWLLNISYKL KNREGLLPAG | 720 |
HAVAKDQLTL NPYKASAMEL KNMEIPNIPV MAPQVQDSDW AYLIVSNDAF RVEISKRSGY | 780 |
LTKYEVDGVD MIKEGEALTP NFWRAPTDND FGAGLQRRYA AWKKPEMKLI SFNHRTENDL | 840 |
VVAEAVYDMP SVSAALSLTY VINNAGAIKV TQKMTTDKNA KISNMFRFGM QMPMPRSFET | 900 |
VEYYGRGPVE NYIDRNHAAD LGIYRQSVSE QFYSYIRPQE NGTKTDIRWW KMLNAAGRGI | 960 |
QVTAGAPFSA SALHYTIESL DEGLEKRQWH SPEVEESDLT NFCIDKVQMG LGCEDSWGRI | 1020 |
ARPEYLLPYG DYEFTFLLSP VKNAIDLE | 1048 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.37 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRKGVVCRHK EFIKFSSMNK HFITGLFTVM ALTANAQSFN EWRDSEVNAV NRAPMHTNYF | 60 |
AYESVDAASR GVKEQSSNFM TLNGTWKFFW VKDADARPVD FWKQGFNDKG WSNMPVPGVW | 120 |
ELNGFGDPIY VNVGYAWRNQ FKNNPPQVPV ENNHVGSYRR EIVVPADWKD KDIVAHFGSV | 180 |
TSNMYLWVNG RYVGYSEDSK LEAEFDLTPY LKPGQKNLIA FQVFRWCDGT YLEDQDFFRY | 240 |
SGVGRNCYLY ARDKKRIEDI RVIPDLDADY KDGSLRVTLN LKGSGNVGME LLDATGKQVA | 300 |
AETMHGSGTV VMNVENPHKW TAETPYLYTL RAILQGSGEV IPVKVGFRKI ELKDSQILVN | 360 |
GQPVLFKGAD RHEMDPDGGY VVSPERMMQD IQIMKQFNLN AVRTCHYPDD NLWYDLCDKY | 420 |
GIYVVAEANV ESHGMGYGDK TLAKNPAYKK AHLERNRRNV QRGFNHPSII FWSLGNEAGY | 480 |
GANFEAAYDW VKAEDPSRAV QYEQAGRKGK TDIFCPMYYS YDACRKYCED ASADKPLIQC | 540 |
EYAHAMGNSE GGFKEYWDLV RKYPKYQGGF IWDFVDQSVR WTGKNGKMIY AYGGDFNRFD | 600 |
ASDGNFCDNG LISPDRVPNP HMYEVGRIYQ NIWTTPSDLK NGEINVFNEY FFRDLSAYYL | 660 |
EWEVLKGGKV IRTGRVDDLN IAPRQTSKIK LDLGKICQCE EWLLNISYKL KNREGLLPAG | 720 |
HAVAKDQLTL NPYKASAMEL KNMEIPNIPV MAPQVQDSDW AYLIVSNDAF RVEISKRSGY | 780 |
LTKYEVDGVD MIKEGEALTP NFWRAPTDND FGAGLQRRYA AWKKPEMKLI SFNHRTENDL | 840 |
VVAEAVYDMP SVSAALSLTY VINNAGAIKV TQKMTTDKNA KISNMFRFGM QMPMPRSFET | 900 |
VEYYGRGPVE NYIDRNHAAD LGIYRQSVSE QFYSYIRPQE NGTKTDIRWW KMLNAAGRGI | 960 |
QVTAGAPFSA SALHYTIESL DEGLEKRQWH SPEVEESDLT NFCIDKVQMG LGCEDSWGRI | 1020 |
ARPEYLLPYG DYEFTFLLSP VKNAIDLE | 1048 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.