Information for CAZyme ID: ADU21136.1
Basic Information
GenBank ID | ADU21136.1 |
Family | CE2 |
Sequence Length | 488 |
UniProt ID | E6UGU9(100,100)![]() |
Average pLDDT? | 78.26 |
CAZy50 ID | 71419 |
CAZy50 Rep | Yes, ADU21136.1 |
Structure Cluster | SC_CE2_clus25 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 697329 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Clostridia |
Order | Eubacteriales |
Family | Oscillospiraceae |
Genus | Ruminococcus |
Species | Ruminococcus albus |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKISRFFAGL CSAALAASIL PVSAEESKTA FCEAVPDNVR ILGRTVYNDD SLWLANSVSG | 60 |
VEFTVTGTQV TFNLNVSGDP TRIGVYLNGQ LYQRGLIGGS SKKGSVTVPL AEGENTVRLI | 120 |
KLSESMQSEL GIDSIETDAG STIKPTSAKE RKLEFIGDSI TCGYGIDLPL KDPSTGENNK | 180 |
FSTLSEDASK TYAYQIASMF DSDVDLFSMS GCGVWCNYGG SRDHTMEKYY RKTSLNTWNS | 240 |
ISSQDYVPIQ DFDWDHSQYQ PDCIVIDLGT NDWTYFDSHE NEKEKFEDSY TDLLKLVREC | 300 |
SPDAKIVCTL GMMGAELYPQ IKNAVDEYKS DTGDKEVYTL KLGQIDPAQE GYGVDYHPLA | 360 |
ASNTRVAENE LGPFIAGIMG WDLGPMPDDG TLTHTPDDLT VGEYHEQPAD NVSDQSESSD | 420 |
PESDVSESST SSAVSSTSSA SSVSESTSSF RTTTNPIQSE DNPTTGMAGG MAMIALMGGA | 480 |
VIASKRKK | 488 |
Predicted 3D structure by AlphaFold2 with pLDDT = 78.26 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MKISRFFAGL CSAALAASIL PVSAEESKTA FCEAVPDNVR ILGRTVYNDD SLWLANSVSG | 60 |
VEFTVTGTQV TFNLNVSGDP TRIGVYLNGQ LYQRGLIGGS SKKGSVTVPL AEGENTVRLI | 120 |
KLSESMQSEL GIDSIETDAG STIKPTSAKE RKLEFIGDSI TCGYGIDLPL KDPSTGENNK | 180 |
FSTLSEDASK TYAYQIASMF DSDVDLFSMS GCGVWCNYGG SRDHTMEKYY RKTSLNTWNS | 240 |
ISSQDYVPIQ DFDWDHSQYQ PDCIVIDLGT NDWTYFDSHE NEKEKFEDSY TDLLKLVREC | 300 |
SPDAKIVCTL GMMGAELYPQ IKNAVDEYKS DTGDKEVYTL KLGQIDPAQE GYGVDYHPLA | 360 |
ASNTRVAENE LGPFIAGIMG WDLGPMPDDG TLTHTPDDLT VGEYHEQPAD NVSDQSESSD | 420 |
PESDVSESST SSAVSSTSSA SSVSESTSSF RTTTNPIQSE DNPTTGMAGG MAMIALMGGA | 480 |
VIASKRKK | 488 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.