Information for CAZyme ID: ADE56317.1
Basic Information
GenBank ID | ADE56317.1 |
Family | GT51 |
Sequence Length | 736 |
UniProt ID | D5ECN5(100,100)![]() |
Average pLDDT? | 86.84 |
CAZy50 ID | 34293 |
CAZy50 Rep | Yes, ADE56317.1 |
Structure Cluster | SC_GT51_clus53 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 572547 |
Kingdom | Bacteria |
Phylum | Synergistota |
Class | Synergistia |
Order | Synergistales |
Family | Aminobacteriaceae |
Genus | Aminobacterium |
Species | Aminobacterium colombiense |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MEARSPLNKK WRKGLVLGGA LLFLLWVSPL LIPLHIEKVR EWPTSPILLD EKLRPFFVSL | 60 |
SSSSEWCIPI SYEQMGAWLP HIAVAIEDRK FWSHHGVDFF AIARAGLQNI RAKKVVSGAS | 120 |
TITSQVIRLS ISRPRTIPMK IAEFLQAMKL ERLLSKKEIL EIYLNRAPFG SNIRGVEAAS | 180 |
RIWFGKPAAT LNVEEAALLI GMLRGPSLFR PDRNPKRAMT LRNQILAAIA DQKLISKSFA | 240 |
AKRAGTPLPD QTYSMPALAF HFAHQVLSQS EALVITTTLD MQLQKRAEHV IQRTLSGLPP | 300 |
SITGAAMVVH NPTGAILAYV GNGRLGTKQW GSWIDCCQAL RSPGSALKPF VYLEAFRRGL | 360 |
LTPSSLLVDS PLSFGGLAPR NFDLTYRGPV SARKALALSL NVPAVRVLRT VGTETLLQTL | 420 |
RAAGIASLTH EPSHYGDSLI LGGCETTVTQ MALAYETLAN LGIQRPLQMV KENDAPYEKR | 480 |
IFDEASCFLI ADILRDPGRL LPVHQEGMAN QNMSIAFKTG TSYGLRDAWT AAYTPEHTIV | 540 |
VWFGDPAGFP HPLLTGLKIA SSAAIEMIQA ATKGKCKWYM PPAALAQREV CALSGLPPTK | 600 |
NCPAHRMDWY IPGISRNDRC SIHQKGKGQP DIPLTQEPQK LTITSPLPQS QFFLTPEGRG | 660 |
QKIALRCEGS KDILFWYLDN EFFGQSKAPK ELFWKLSPGR HSISVMDEQG RSDSISIEVL | 720 |
SLSSPKPQSA PLLELH | 736 |
Predicted 3D structure by AlphaFold2 with pLDDT = 86.84 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MEARSPLNKK WRKGLVLGGA LLFLLWVSPL LIPLHIEKVR EWPTSPILLD EKLRPFFVSL | 60 |
SSSSEWCIPI SYEQMGAWLP HIAVAIEDRK FWSHHGVDFF AIARAGLQNI RAKKVVSGAS | 120 |
TITSQVIRLS ISRPRTIPMK IAEFLQAMKL ERLLSKKEIL EIYLNRAPFG SNIRGVEAAS | 180 |
RIWFGKPAAT LNVEEAALLI GMLRGPSLFR PDRNPKRAMT LRNQILAAIA DQKLISKSFA | 240 |
AKRAGTPLPD QTYSMPALAF HFAHQVLSQS EALVITTTLD MQLQKRAEHV IQRTLSGLPP | 300 |
SITGAAMVVH NPTGAILAYV GNGRLGTKQW GSWIDCCQAL RSPGSALKPF VYLEAFRRGL | 360 |
LTPSSLLVDS PLSFGGLAPR NFDLTYRGPV SARKALALSL NVPAVRVLRT VGTETLLQTL | 420 |
RAAGIASLTH EPSHYGDSLI LGGCETTVTQ MALAYETLAN LGIQRPLQMV KENDAPYEKR | 480 |
IFDEASCFLI ADILRDPGRL LPVHQEGMAN QNMSIAFKTG TSYGLRDAWT AAYTPEHTIV | 540 |
VWFGDPAGFP HPLLTGLKIA SSAAIEMIQA ATKGKCKWYM PPAALAQREV CALSGLPPTK | 600 |
NCPAHRMDWY IPGISRNDRC SIHQKGKGQP DIPLTQEPQK LTITSPLPQS QFFLTPEGRG | 660 |
QKIALRCEGS KDILFWYLDN EFFGQSKAPK ELFWKLSPGR HSISVMDEQG RSDSISIEVL | 720 |
SLSSPKPQSA PLLELH | 736 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.