Information for CAZyme ID: ADB47590.1
Basic Information
| GenBank ID | ADB47590.1 |
| Family | GH73 |
| Sequence Length | 387 |
| UniProt ID | D2RKI8(100,100) |
| Average pLDDT? | 63.00 |
| CAZy50 ID | 106772 |
| CAZy50 Rep | Yes, ADB47590.1 |
| Structure Cluster | SC_GH73_clus260 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 591001 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Negativicutes |
| Order | Acidaminococcales |
| Family | Acidaminococcaceae |
| Genus | Acidaminococcus |
| Species | Acidaminococcus fermentans |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNKNKKRMLA GLLLASLLGT GTVWASPLEQ GVKPAETVLL DETDGPLSHI QKKKTEKKAK | 60 |
| VQKEREPEKK EHRSFLDRIR GIRKQQETTE PARKPEKVRK PDPPAENPSR KNRKERPAGK | 120 |
| QAKEEKQRPL SPVSRDLGPA DPDSLVIRKG SLSLVGEKLT LPQWPDPDRL LKLENQDRVI | 180 |
| TDPSLKIIIH HLTTTAKIWE LPDNYQEVTI AGPAEATRDQ AVVLLRRYNP NLPIKATPEE | 240 |
| IVDLYYQEAG REGLRWDIVF CQALLETGFF RFGGTVVPAQ NNFCGLGTTS ATVQGAWFPT | 300 |
| PRDGVRAHVQ HLMAYTTDRL PATPVIDPRY YLVYKGKVQN GFYTRWSQLN GKWATGSYYA | 360 |
| EKILNLHEQM KKIIAISGND WDGGLLK | 387 |
Predicted 3D structure by AlphaFold2 with pLDDT = 63.00 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MNKNKKRMLA GLLLASLLGT GTVWASPLEQ GVKPAETVLL DETDGPLSHI QKKKTEKKAK | 60 |
| VQKEREPEKK EHRSFLDRIR GIRKQQETTE PARKPEKVRK PDPPAENPSR KNRKERPAGK | 120 |
| QAKEEKQRPL SPVSRDLGPA DPDSLVIRKG SLSLVGEKLT LPQWPDPDRL LKLENQDRVI | 180 |
| TDPSLKIIIH HLTTTAKIWE LPDNYQEVTI AGPAEATRDQ AVVLLRRYNP NLPIKATPEE | 240 |
| IVDLYYQEAG REGLRWDIVF CQALLETGFF RFGGTVVPAQ NNFCGLGTTS ATVQGAWFPT | 300 |
| PRDGVRAHVQ HLMAYTTDRL PATPVIDPRY YLVYKGKVQN GFYTRWSQLN GKWATGSYYA | 360 |
| EKILNLHEQM KKIIAISGND WDGGLLK | 387 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.