CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: ACU75354.1

Basic Information

GenBank IDACU75354.1
FamilyCBM35, GH18
Sequence Length580
UniProt IDC7PY64(100,100)Download
Average pLDDT?89.23
CAZy50 ID55152
CAZy50 RepYes, ACU75354.1
Structure ClusterSC_CBM35_clus21, SC_GH18_clus108
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID479433
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderCatenulisporales
FamilyCatenulisporaceae
GenusCatenulispora
SpeciesCatenulispora acidiphila

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTSPPTLYRT  GVSGVVALSL  AAVTAVAGSM  LFAHSATAAP  TLAVTGYAEE  GTANSAIDAS60
AAAMATVGVD  GININSAGTS  APAPDAGATS  LLAKAHADNL  RAEFLVGNYS  SSIGDFDPAA120
LDRLLSSPSN  INSVVTTVVN  AVNSQGWDGV  TIDFESILGQ  DAQGLVDFST  ALKQAMPAAK180
TVSIDVTAYQ  TAAEYTANGY  NLSGLGGAVD  RIALMAYDEH  GPTWNGVGPI  GGLPWQEACL240
RQLLTQVPAA  KVDLGVAGYG  YTWPKTGTGR  QVSDAQARQM  VAGDGSTATW  DSTQGEWTAT300
LKNGTVMWWS  DAKSWPLRAT  LAQKYAVHGM  ALWSLGLSDP  LPVTAPANGF  SVAASPASGS360
VAAGASSTST  VSTAVTSGTA  QSVALTAGGV  PAGASVSFSP  ASVTAGSSST  MTVTTSSSTP420
VGTYPITVTG  RAASGSHTAT  YTLTVTTASG  STVYEAEASS  SVLAGGAKVV  TCAACSGGAR480
VGYLGGTGTL  TMKNITVATA  GSYQVTIAYT  NGDTGNLRIM  LSVNGGANAT  FTGAPTTNWD540
TPATGTITVS  LAVGTNTILF  SNTGTTGDVP  DIDKIAVVSK  580

Predicted 3D structure by AlphaFold2 with pLDDT = 89.23 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence:
CAPSIF:V and CAPSIF:G =99.9;
CAPSIF:V =59.9;
CAPSIF:G =40;
Non-Binding=0;     Download help

MTSPPTLYRT  GVSGVVALSL  AAVTAVAGSM  LFAHSATAAP  TLAVTGYAEE  GTANSAIDAS60
AAAMATVGVD  GININSAGTS  APAPDAGATS  LLAKAHADNL  RAEFLVGNYS  SSIGDFDPAA120
LDRLLSSPSN  INSVVTTVVN  AVNSQGWDGV  TIDFESILGQ  DAQGLVDFST  ALKQAMPAAK180
TVSIDVTAYQ  TAAEYTANGY  NLSGLGGAVD  RIALMAYDEH  GPTWNGVGPI  GGLPWQEACL240
RQLLTQVPAA  KVDLGVAGYG  YTWPKTGTGR  QVSDAQARQM  VAGDGSTATW  DSTQGEWTAT300
LKNGTVMWWS  DAKSWPLRAT  LAQKYAVHGM  ALWSLGLSDP  LPVTAPANGF  SVAASPASGS360
VAAGASSTST  VSTAVTSGTA  QSVALTAGGV  PAGASVSFSP  ASVTAGSSST  MTVTTSSSTP420
VGTYPITVTG  RAASGSHTAT  YTLTVTTASG  STVYEAEASS  SVLAGGAKVV  TCAACSGGAR480
VGYLGGTGTL  TMKNITVATA  GSYQVTIAYT  NGDTGNLRIM  LSVNGGANAT  FTGAPTTNWD540
TPATGTITVS  LAVGTNTILF  SNTGTTGDVP  DIDKIAVVSK  580

Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help

Residues were colored according to prediction score:

Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder

CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).

Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.

For more detail please see CAPSIF.

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(45-336)+CBM35(457-577)

MTSPPTLYRT  GVSGVVALSL  AAVTAVAGSM  LFAHSATAAP  TLAVTGYAEE  GTANSAIDAS60
AAAMATVGVD  GININSAGTS  APAPDAGATS  LLAKAHADNL  RAEFLVGNYS  SSIGDFDPAA120
LDRLLSSPSN  INSVVTTVVN  AVNSQGWDGV  TIDFESILGQ  DAQGLVDFST  ALKQAMPAAK180
TVSIDVTAYQ  TAAEYTANGY  NLSGLGGAVD  RIALMAYDEH  GPTWNGVGPI  GGLPWQEACL240
RQLLTQVPAA  KVDLGVAGYG  YTWPKTGTGR  QVSDAQARQM  VAGDGSTATW  DSTQGEWTAT300
LKNGTVMWWS  DAKSWPLRAT  LAQKYAVHGM  ALWSLGLSDP  LPVTAPANGF  SVAASPASGS360
VAAGASSTST  VSTAVTSGTA  QSVALTAGGV  PAGASVSFSP  ASVTAGSSST  MTVTTSSSTP420
VGTYPITVTG  RAASGSHTAT  YTLTVTTASG  STVYEAEASS  SVLAGGAKVV  TCAACSGGAR480
VGYLGGTGTL  TMKNITVATA  GSYQVTIAYT  NGDTGNLRIM  LSVNGGANAT  FTGAPTTNWD540
TPATGTITVS  LAVGTNTILF  SNTGTTGDVP  DIDKIAVVSK  580

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help