Information for CAZyme ID: ACO67993.1
Basic Information
GenBank ID | ACO67993.1 |
Family | GT77 |
Sequence Length | 746 |
UniProt ID | C1EJ83(100,100)![]() |
Average pLDDT? | 75.17 |
CAZy50 ID | 33164 |
CAZy50 Rep | Yes, ACO67993.1 |
Structure Cluster | SC_GT77_clus50 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 296587 |
Kingdom | Eukaryota |
Phylum | Chlorophyta |
Class | Mamiellophyceae |
Order | Mamiellales |
Family | Mamiellaceae |
Genus | Micromonas |
Species | Micromonas commoda |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRLGLFLRLL YASASLRFNP SSQRASNAHT PRIQCLDRVQ VAWCSHSVGG EAVRAYPFCT | 60 |
MRCTVRRLIV YTVLITLISY TGFRLTQPVS IPISNPAANV GIVRSAGVQA GGETREPRMG | 120 |
ASEPKIDVAS VTPIVPTETR VDDLEEQPTS SPPPPQPAQP RAPPPPPTPL LGADDQVVVK | 180 |
AEGNATVETE VNATRIHVGK PGEYVAPKSK LAEDNQLTAE LVGRYAEDNI VMVTWANHHY | 240 |
HDFVRNWVRN VRKCGMRNYM VGAMDNELLE KLIDDEVPTF AMQSGLTTKD FGWGTANFHK | 300 |
MGRKKIELIH LFTEMGFDIL VSDVDTVWLR NPLPYMAKYP HADVLTSSDH LANTAEGEGL | 360 |
EDPRKAHSAA NIGIMLLRDT AKELAKEWVD VLEKDDKVWD QNVFNDLYRR GGGPSVKDDK | 420 |
NVVTGYDGKL KVGILPVSMF ASGHTYFVQR MHEKVGVEPY VVHATFQYSG TEGKRHRMRE | 480 |
ALLWEDSPEY YDPPGGLLVF TPDVPKELLD NSQSVEGHFD LVNHQILQVR SALQVAQKLG | 540 |
RVLVMPELYC GFDRWWAPHK GTIPGSDTTL PYLCPMDHVF EVETWMREQP VEESGPHIDF | 600 |
REYSFFRNPL VPTNVRDSTV TVSLVDECGR EECTQAVGKA APAGQDTIVA ARNFTDVQVQ | 660 |
TLLTEYKDVK VLNFTSMVGA FSQFEDPEDA KKFSNRIKKY AAIWCCKHRN PGHIWYDMEF | 720 |
DIVPHVDRHN RKWDGGKNKW KLVTGP | 746 |
Predicted 3D structure by AlphaFold2 with pLDDT = 75.17 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRLGLFLRLL YASASLRFNP SSQRASNAHT PRIQCLDRVQ VAWCSHSVGG EAVRAYPFCT | 60 |
MRCTVRRLIV YTVLITLISY TGFRLTQPVS IPISNPAANV GIVRSAGVQA GGETREPRMG | 120 |
ASEPKIDVAS VTPIVPTETR VDDLEEQPTS SPPPPQPAQP RAPPPPPTPL LGADDQVVVK | 180 |
AEGNATVETE VNATRIHVGK PGEYVAPKSK LAEDNQLTAE LVGRYAEDNI VMVTWANHHY | 240 |
HDFVRNWVRN VRKCGMRNYM VGAMDNELLE KLIDDEVPTF AMQSGLTTKD FGWGTANFHK | 300 |
MGRKKIELIH LFTEMGFDIL VSDVDTVWLR NPLPYMAKYP HADVLTSSDH LANTAEGEGL | 360 |
EDPRKAHSAA NIGIMLLRDT AKELAKEWVD VLEKDDKVWD QNVFNDLYRR GGGPSVKDDK | 420 |
NVVTGYDGKL KVGILPVSMF ASGHTYFVQR MHEKVGVEPY VVHATFQYSG TEGKRHRMRE | 480 |
ALLWEDSPEY YDPPGGLLVF TPDVPKELLD NSQSVEGHFD LVNHQILQVR SALQVAQKLG | 540 |
RVLVMPELYC GFDRWWAPHK GTIPGSDTTL PYLCPMDHVF EVETWMREQP VEESGPHIDF | 600 |
REYSFFRNPL VPTNVRDSTV TVSLVDECGR EECTQAVGKA APAGQDTIVA ARNFTDVQVQ | 660 |
TLLTEYKDVK VLNFTSMVGA FSQFEDPEDA KKFSNRIKKY AAIWCCKHRN PGHIWYDMEF | 720 |
DIVPHVDRHN RKWDGGKNKW KLVTGP | 746 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.