Information for CAZyme ID: ACM60952.1
Basic Information
| GenBank ID | ACM60952.1 |
| Family | GT39 |
| Sequence Length | 566 |
| UniProt ID | B9MKU4(100,100) |
| Average pLDDT? | 93.27 |
| CAZy50 ID | 57088 |
| CAZy50 Rep | Yes, ACM60952.1 |
| Structure Cluster | SC_GT39_clus43 |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 521460 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | |
| Order | Caldicellulosiruptorales |
| Family | Caldicellulosiruptoraceae |
| Genus | Caldicellulosiruptor |
| Species | Caldicellulosiruptor bescii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MKGKNVLLLL SILIATGYFI LQVISIGSRE IPTTYWASKE EGSTIEVRIS PKMFIKDFFI | 60 |
| YFGYGDGKVD IQFLNDNSVI FQQSVQSAFF QGKVILVNNV VDKVLIVTHG NGLEIREIAA | 120 |
| KKDDKQFIDF SKAEIVILKG FKYLGNPYNL VDEQAKMRSI VSYRYSSYFD EIYHARTAYE | 180 |
| LLKGLPPYDL VHPPLGKWLI SVGMAVWGVN PFGWRIVNLI FGSIALVLIL ILFTKLHKPS | 240 |
| FWCGIAIIIL MASDFLHNSL SRTANLDTFS LFFILLCSIF GMSYISSILK KKEKLSKTNL | 300 |
| AYFLTFSTGG LAFACKWNAL YSIIPILTIS FSYRVHNLIK NNDKNWVVKV IKNGLLSIIA | 360 |
| FLIPYYLTYL PITIKYPYHN LPGAVISDFI MLQNHIWKYH STLVATHPFS SEWYQWLLAT | 420 |
| KPLWAYYDNS LPSNLRSTIA YLGNPVIWGL GLLALAYLLI VALKNPKDNL SSFIVITSYI | 480 |
| SSIVPWMFIG RIKFIYHYYL ALPWLYIAIA MAIDNLRLKQ GLKEKVAMTV SSLALIMLII | 540 |
| YYPAVSGLTV SAKYINMLKI MKSWIF | 566 |
Predicted 3D structure by AlphaFold2 with pLDDT = 93.27 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
| MKGKNVLLLL SILIATGYFI LQVISIGSRE IPTTYWASKE EGSTIEVRIS PKMFIKDFFI | 60 |
| YFGYGDGKVD IQFLNDNSVI FQQSVQSAFF QGKVILVNNV VDKVLIVTHG NGLEIREIAA | 120 |
| KKDDKQFIDF SKAEIVILKG FKYLGNPYNL VDEQAKMRSI VSYRYSSYFD EIYHARTAYE | 180 |
| LLKGLPPYDL VHPPLGKWLI SVGMAVWGVN PFGWRIVNLI FGSIALVLIL ILFTKLHKPS | 240 |
| FWCGIAIIIL MASDFLHNSL SRTANLDTFS LFFILLCSIF GMSYISSILK KKEKLSKTNL | 300 |
| AYFLTFSTGG LAFACKWNAL YSIIPILTIS FSYRVHNLIK NNDKNWVVKV IKNGLLSIIA | 360 |
| FLIPYYLTYL PITIKYPYHN LPGAVISDFI MLQNHIWKYH STLVATHPFS SEWYQWLLAT | 420 |
| KPLWAYYDNS LPSNLRSTIA YLGNPVIWGL GLLALAYLLI VALKNPKDNL SSFIVITSYI | 480 |
| SSIVPWMFIG RIKFIYHYYL ALPWLYIAIA MAIDNLRLKQ GLKEKVAMTV SSLALIMLII | 540 |
| YYPAVSGLTV SAKYINMLKI MKSWIF | 566 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.