Information for CAZyme ID: ABA49091.1
Basic Information
GenBank ID | ABA49091.1 |
Family | GT51 |
Sequence Length | 616 |
UniProt ID | Q3JNJ0(100,100)![]() |
Average pLDDT? | 57.42 |
CAZy50 ID | 50073 |
CAZy50 Rep | Yes, ABA49091.1 |
Structure Cluster | SC_GT51_clus110 |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 320372 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Betaproteobacteria |
Order | Burkholderiales |
Family | Burkholderiaceae |
Genus | Burkholderia |
Species | Burkholderia pseudomallei |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRRWCRAASR PTKTRTPTRP TRRCSTPPTN RRKAKRKRSP RRAARRAATA NRPRTARNNR | 60 |
NEHGRRIGSA RARSLCGDRQ SDRAQQIAVH PFAFRRADGR GDRIHASARA ARRLFGHGAR | 120 |
VHRAGRPRRE RHGAVQARGL CARRCAVAAR GGGGRGQHAA LRRGRRFRRQ HRRRRPRARH | 180 |
RGESRREPHG RADPAARRGR RGTRRRAADA RARARVAHDR QPDREQGGRT RRPVHAGGAR | 240 |
RGLRARRRRA RTDRARAVRR DRQRDGGQPR RGAARVRRGG LRPGDARVRH DVRRAPDRVH | 300 |
GARRGARRAH GGWPRNARRA GRGIVPRLAR RATRQRARAR RAARRARGVG RALSAGGARG | 360 |
MRNSPVSPGP GYAPARGSER ARRRGVARWL AYVGGVFAGA WLATQLYYAV QIAMWSVFDP | 420 |
GSSAFMRADA WRLSNAQPAT TIRHRWVPYD QIARTLKRAV IASEDADFAN NSGYEVDAIL | 480 |
QAWEKNRARG RIVSGGSTIT QQLARNLFLS GERSYIRKGQ ELIITWMLET LLDKERIFEI | 540 |
YLNSVEFGRG VYGAQAAAQY YYRIPASRLS AWQSARLAVM LPNPKYFDAH RGSPYLAQRA | 600 |
GVIARRMGAA ELPASQ | 616 |
Predicted 3D structure by AlphaFold2 with pLDDT = 57.42 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Full Sequence: CAPSIF:V and CAPSIF:G =99.9; CAPSIF:V =59.9; CAPSIF:G =40; Non-Binding=0; Download help
MRRWCRAASR PTKTRTPTRP TRRCSTPPTN RRKAKRKRSP RRAARRAATA NRPRTARNNR | 60 |
NEHGRRIGSA RARSLCGDRQ SDRAQQIAVH PFAFRRADGR GDRIHASARA ARRLFGHGAR | 120 |
VHRAGRPRRE RHGAVQARGL CARRCAVAAR GGGGRGQHAA LRRGRRFRRQ HRRRRPRARH | 180 |
RGESRREPHG RADPAARRGR RGTRRRAADA RARARVAHDR QPDREQGGRT RRPVHAGGAR | 240 |
RGLRARRRRA RTDRARAVRR DRQRDGGQPR RGAARVRRGG LRPGDARVRH DVRRAPDRVH | 300 |
GARRGARRAH GGWPRNARRA GRGIVPRLAR RATRQRARAR RAARRARGVG RALSAGGARG | 360 |
MRNSPVSPGP GYAPARGSER ARRRGVARWL AYVGGVFAGA WLATQLYYAV QIAMWSVFDP | 420 |
GSSAFMRADA WRLSNAQPAT TIRHRWVPYD QIARTLKRAV IASEDADFAN NSGYEVDAIL | 480 |
QAWEKNRARG RIVSGGSTIT QQLARNLFLS GERSYIRKGQ ELIITWMLET LLDKERIFEI | 540 |
YLNSVEFGRG VYGAQAAAQY YYRIPASRLS AWQSARLAVM LPNPKYFDAH RGSPYLAQRA | 600 |
GVIARRMGAA ELPASQ | 616 |
Carbohydrate binding residues Predicted by CAPSIF from 3D structure; Download help
Residues were colored according to prediction score:
Nonbinder, CAPSIF:G Predicted Binder, CAPSIF:V Predicted Binder, CAPSIF:V and CAPSIF:G Predicted Binder
CArbohydrate–Protein interaction Site IdentiFier (CAPSIF) that predicts non-covalent carbohydrate-binding sites on proteins: (1) a 3D-UNet voxel-based neural network model (CAPSIF:V) and (2) an equivariant graph neural network model (CAPSIF:G).
Details:
⋆B-Factor = 0.0 : Nonbinder.
⋆B-Factor = 40.0 : CAPSIF:G Predicted Binder.
⋆B-Factor = 59.9 : CAPSIF:V Predicted Binder.
⋆B-Factor = 99.9 : CAPSIF:V and CAPSIF:G Predicted Binder.
For more detail please see CAPSIF.