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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna08139.1-v1.0-hybrid |
Family | GT1 |
Protein Properties | Length: 620 Molecular Weight: 68618.1 Isoelectric Point: 5.9763 |
Chromosome | Chromosome/Scaffold: 2 Start: 1859986 End: 1869439 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 259 | 580 | 0 |
PFKAQAIIANPPAYGHAHVAEALGVPLHIFFTMPWTDEHSFDLNDGRPTYEFPHPLARVPQSAGYWLSYIVVDLLIWWGIRSYINDFRKKKLKLAPIAYF STYHGSISHLPTGYMWSPHVVPKPSDWGSLVDVVGYCFLNHGSKYQPQDEFVQWIQKGPKPIYIGFGSMPLEDPKKTTDIILEALKDTGQRGIIDRGWGD LGNLTEASDNVFQLEDCPHDWLFPQCSAVVHHGGAGTTATGLRAGCPTTIVPFFGDQFFWGDRIHAKGLGPAPIPISQLDVESLSNAIRFMLEPEVKSRA LEIAKLIENEDGVAAAVDAFHR |
Full Sequence |
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Protein Sequence Length: 620 Download |
MGSNGVDHPL KLSEDESVSS PGQSSFRKAK TKRINSGGRS SVLEIFQSKE FDDGSSPRTG 60 LDHWITAPIG TPKNLLIDEH EIKFARSLTE RRESRRHDLM LDRLSERDKK KLIVEMVKIQ 120 NDGTVEVDLE RSAPVASELL ELHSVEDVPI SLDDTTSSIT KSIPRLKIAM LVVGTRGDEF 180 GHRVRLATHA NFSTFVKSAG VEFYPLGGDP RVLAGYMARN KGLIPSGPGE ISIQRKELKA 240 IIESLLPACT EPDIETGLPF KAQAIIANPP AYGHAHVAEA LGVPLHIFFT MPWTDEHSFD 300 LNDGRPTYEF PHPLARVPQS AGYWLSYIVV DLLIWWGIRS YINDFRKKKL KLAPIAYFST 360 YHGSISHLPT GYMWSPHVVP KPSDWGSLVD VVGYCFLNHG SKYQPQDEFV QWIQKGPKPI 420 YIGFGSMPLE DPKKTTDIIL EALKDTGQRG IIDRGWGDLG NLTEASDNVF QLEDCPHDWL 480 FPQCSAVVHH GGAGTTATGL RAGCPTTIVP FFGDQFFWGD RIHAKGLGPA PIPISQLDVE 540 SLSNAIRFML EPEVKSRALE IAKLIENEDG VAAAVDAFHR QLPPELPLPT ASSEEDEPVN 600 PLQWLFLQVE KWCCLPCGS* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01426 | MGT | 0.002 | 415 | 576 | 164 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
pfam03033 | Glyco_transf_28 | 1.0e-23 | 168 | 294 | 139 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
COG1819 | COG1819 | 9.0e-27 | 165 | 580 | 433 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
cd03784 | GT1_Gtf_like | 1.0e-113 | 167 | 580 | 430 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1iir_A | 1e-25 | 408 | 583 | 229 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 3h4t_A | 3e-25 | 408 | 581 | 212 | 384 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 3h4i_A | 3e-25 | 408 | 581 | 212 | 384 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1rrv_B | 6e-21 | 271 | 565 | 107 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 6e-21 | 271 | 565 | 107 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
Sequence Alignments (This image is cropped. Click for full image.) |
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