y
Basic Information | |
---|---|
Species | Medicago truncatula |
Cazyme ID | Medtr4g022580.1 |
Family | GT1 |
Protein Properties | Length: 624 Molecular Weight: 68403.8 Isoelectric Point: 6.4253 |
Chromosome | Chromosome/Scaffold: 4 Start: 6429522 End: 6440220 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT1 | 185 | 592 | 0 |
IVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPVQRNQMKEIINSLLPACKEPDIDSGVP FKADAIMANPPAYGHTHVAEALQIPIHIFFTMPWTPTADFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGFENDIPH AYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLEDGDKPIYIGFGSLPVQDPKKMTQIIVEALETTGQRGIINKGWGGLGDLTEPKDSIY LLDNVPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPVDEFSLPKLIDAINFMLDPKVKEHAIELAKAMENEDG VTGAVKAF |
Full Sequence |
---|
Protein Sequence Length: 624 Download |
MAELPDNRRR SSSSSSSSSD RSVKVEREFV TGNESTTNEV VDSTDSVSNG VSAINGESSS 60 STSGIPSTGL SKVTTLPVDI SHGDKIESSP SKFKLERSKT ERQRHLRPED AAQIFNNKIP 120 VQEKLRLLNR IATVKDDGTV EFDVPIDVEP DALGAGSKHV NNVIDDSHGA TDLDYIPPLN 180 IVMLIVGTRG DVQPFVAIGK RLQDYGHRVR LATHSNFKEF VLTAGLEFYP LGGDPKVLAG 240 YMVKNKGFLP SGPSEIPVQR NQMKEIINSL LPACKEPDID SGVPFKADAI MANPPAYGHT 300 HVAEALQIPI HIFFTMPWTP TADFPHPLSR VKQQAGYRLS YQIVDSLIWL GIRDMINDLR 360 KKKLKLRPVT YLSGSQGFEN DIPHAYIWSP HLVPKPKDWG PKIDVVGFCF LDLASNYEPP 420 ESLVKWLEDG DKPIYIGFGS LPVQDPKKMT QIIVEALETT GQRGIINKGW GGLGDLTEPK 480 DSIYLLDNVP HDWLFLQCKA VVHHGGAGTT AAGLKAACPT TIVPFFGDQP FWGERVHDRG 540 VGPPPIPVDE FSLPKLIDAI NFMLDPKVKE HAIELAKAME NEDGVTGAVK AFFKQLPQKK 600 PETNTEPSPS SCFSNIARCF GHS* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03033 | Glyco_transf_28 | 1.0e-34 | 181 | 322 | 142 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
COG1819 | COG1819 | 2.0e-35 | 181 | 603 | 433 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
cd03784 | GT1_Gtf_like | 5.0e-120 | 180 | 592 | 413 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC22616.1 | 0 | 15 | 623 | 6 | 609 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
DDBJ | BAC22617.1 | 0 | 26 | 623 | 3 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
EMBL | CBI37267.1 | 0 | 1 | 623 | 1 | 615 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 1 | 623 | 48 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002521125.1 | 0 | 1 | 623 | 1 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 1e-32 | 179 | 600 | 1 | 385 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3h4i_A | 1e-32 | 179 | 600 | 1 | 385 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1iir_A | 2e-24 | 179 | 605 | 1 | 407 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 1pnv_B | 2e-20 | 179 | 601 | 1 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 1pnv_A | 2e-20 | 179 | 601 | 1 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GT046352 | 335 | 188 | 522 | 0 |
GO883166 | 334 | 143 | 474 | 0 |
DY295142 | 421 | 75 | 490 | 0 |
GO260617 | 292 | 105 | 396 | 0 |
GT046352 | 32 | 515 | 546 | 0.004 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|