y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si011734m |
Family | AA2 |
Protein Properties | Length: 561 Molecular Weight: 60703.5 Isoelectric Point: 12.0853 |
Chromosome | Chromosome/Scaffold: 7 Start: 23970079 End: 23973261 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 294 | 543 | 0 |
KLLRLVFHDCFVEGCDASVLIQGSGTERTDPANLSLGGFNVIDAAKRLLEVVCPATVSCSDIIVLAARDAVVFTGGPAVPVMLGRRDGLVSLASNVRRNI IDTGFSVDAMAASFTAKGLTLDDLVTLSGGHTIGSAHCNTFRERFQVANGSMAPVDGSMNTDYANELIRACSANGTVSAGTAVDCDSGSASVFDNRYFAN LLEGRGLLRTDAVLVQNATTRAKVAEFAQSQDGFFASWADSYARLTGLGV |
Full Sequence |
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Protein Sequence Length: 561 Download |
IPSRHRLAFP PPAPISISLS HPLRAPSHHL PLTPGEGKRP FLARGDVPVS FRRALLVLVR 60 SRWGGGSAAQ SSAQCCYCRR CWRSPPRSRL PRPSRRLRAR RGLLRRRPRG RPRQLRGCRS 120 HRCRLPRSRH PRHPQRQLGS HPRLRGRLQR CRLHPARHRR RGRCLRLPRQ FLPRRGRLRR 180 RGSRNHLPRM LRLRHGPAPT PPPPPPWSSQ APRPSPSPTI PAPQPPTAPK PSPSPASPPP 240 PATPQHSANS TPSTSSTLGQ LSPSFYAQSC PGVELAVRDV VRSASLLDPS IPGKLLRLVF 300 HDCFVEGCDA SVLIQGSGTE RTDPANLSLG GFNVIDAAKR LLEVVCPATV SCSDIIVLAA 360 RDAVVFTGGP AVPVMLGRRD GLVSLASNVR RNIIDTGFSV DAMAASFTAK GLTLDDLVTL 420 SGGHTIGSAH CNTFRERFQV ANGSMAPVDG SMNTDYANEL IRACSANGTV SAGTAVDCDS 480 GSASVFDNRY FANLLEGRGL LRTDAVLVQN ATTRAKVAEF AQSQDGFFAS WADSYARLTG 540 LGVKTGADGE IRRTCSSVNG * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.0003 | 493 | 523 | 31 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 5.0e-22 | 276 | 539 | 296 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 1.0e-53 | 277 | 426 | 151 | + Peroxidase. | ||
PLN03030 | PLN03030 | 5.0e-78 | 265 | 559 | 303 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 3.0e-136 | 260 | 558 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR34255.1 | 0 | 248 | 560 | 170 | 484 | unknown [Zea mays] |
GenBank | EAY94719.1 | 0 | 307 | 560 | 52 | 307 | hypothetical protein OsI_16496 [Oryza sativa Indica Group] |
GenBank | EEC71855.1 | 0 | 306 | 560 | 481 | 775 | hypothetical protein OsI_04549 [Oryza sativa Indica Group] |
RefSeq | NP_001053214.1 | 0 | 260 | 560 | 206 | 508 | Os04g0498700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448121.1 | 0 | 210 | 560 | 123 | 498 | hypothetical protein SORBIDRAFT_06g021550 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 260 | 560 | 2 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1pa2_A | 0 | 260 | 560 | 2 | 305 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1qgj_B | 0 | 260 | 559 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 260 | 559 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1gx2_B | 0 | 260 | 559 | 2 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CD439981 | 262 | 249 | 508 | 0 |
CA210170 | 251 | 298 | 547 | 0 |
ES300492 | 239 | 258 | 496 | 0 |
FL871568 | 206 | 356 | 561 | 0 |
FL727729 | 215 | 347 | 561 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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