y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009466m |
Family | CBM57 |
Protein Properties | Length: 740 Molecular Weight: 80329.5 Isoelectric Point: 8.2099 |
Chromosome | Chromosome/Scaffold: 7 Start: 29925243 End: 29931205 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 378 | 547 | 1.5e-28 |
FAVDCGGSTTISGSDNSMYQADNATLGAASYYVAGAPTWGVSSVGLFTNAPNGTYIIYSSRQFDNTLDSSLFQTARMSPSSLRYYGIGLENGNYTVTLQF AEVDFPDIESWRSRGRRVFDIYIQGDRKEQNFDIRMAAGGKSFTVVKKKYVVPVTKNFLEIHLFWAGKGT |
Full Sequence |
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Protein Sequence Length: 740 Download |
MKPRLSGGGF LLVLLLLNSW RAVAQAPPPP QTDPVEAAAV NAILSKLGLS APASWNISGN 60 PCSGAATDDT QLDDNPAFNP AIKCDCSDRN NTLCHVTRFK INMLDAVGPI PEELRNLTHL 120 RKLDLRRNYL TGPLPAFIGE LTALESMTVG INALSGPIPK ELGNLVNLVS LALGSNNFNG 180 TLPDELGKLT KLRQIYIDSN DFSGPLPSTL SQLKNLSILW ASDNNFTGQI PDYLGSLTNL 240 TDLKLQGNSF QGPIPKSLSN LVKLSKLVLR NSKISDTLAS VDFSKFGNLS LLDLSFNNIT 300 GPIPQSILNL PSLSYLDFSY NYLSGNFPSW ATKKNLQLNL VANDFVIDSS NNSVLPWGLD 360 CLQHNIPCFL GSPQSASFAV DCGGSTTISG SDNSMYQADN ATLGAASYYV AGAPTWGVSS 420 VGLFTNAPNG TYIIYSSRQF DNTLDSSLFQ TARMSPSSLR YYGIGLENGN YTVTLQFAEV 480 DFPDIESWRS RGRRVFDIYI QGDRKEQNFD IRMAAGGKSF TVVKKKYVVP VTKNFLEIHL 540 FWAGKGTCCI PYKGYYGPAI SALSATPNFV PTVRSSADRK SSSKTGVIVG VVVSVSVFAL 600 ITLAGIFLWC QKRRKLLLEL EELYTIVGRP NVFSYSELRS ATENFCSSNL LGKGGYGSVY 660 KGKLSDGRVV AVKQLSQSSN QGKKQFAAEI DTISRVQHRN LVSLYGCCLE SNTPLLVYEY 720 LENGSLDHAL FGMNFPDLT* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 3.0e-26 | 108 | 345 | 245 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-29 | 91 | 345 | 283 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 8.0e-36 | 101 | 345 | 251 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 7.0e-36 | 102 | 359 | 261 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 1.0e-53 | 377 | 563 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD41800.2 | 0 | 1 | 732 | 1 | 785 | OSJNBa0008M17.16 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAD41882.2 | 0 | 31 | 733 | 31 | 784 | OSJNBa0093O08.1 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAJ86312.1 | 0 | 1 | 732 | 1 | 697 | H0525G02.9 [Oryza sativa (indica cultivar-group)] |
GenBank | EEE61685.1 | 0 | 44 | 732 | 1 | 623 | hypothetical protein OsJ_16158 [Oryza sativa Japonica Group] |
GenBank | EEE61686.1 | 0 | 31 | 733 | 31 | 760 | hypothetical protein OsJ_16159 [Oryza sativa Japonica Group] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 1e-24 | 107 | 328 | 404 | 670 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 3e-21 | 120 | 290 | 393 | 563 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 1e-20 | 107 | 375 | 279 | 536 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 8e-20 | 108 | 334 | 354 | 558 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 5e-17 | 105 | 331 | 474 | 721 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |