y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 892639 |
Family | CBM57 |
Protein Properties | Length: 901 Molecular Weight: 98324.9 Isoelectric Point: 6.9211 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 409 | 577 | 3e-26 |
SINCGGPEIRSASGALYEKEDMDLGPASFVVSAAQRWAASSVGNFAGSSRNKYRETSQSQFINTLDSELFQSARLSASSLRYYGLGLENGGYTVTLQFAE IQIQGSNSWKGIGRRRFDIYVQGRLVEKDFDIRRTAGGSSVRAVQREYKTNVSENHLEVHLFWAGKGTC |
Full Sequence |
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Protein Sequence Length: 901 Download |
MLRLRRSLFL LLTVWFLYSS GSVHVVVRAQ NQNGATTHPD EVIVETTARA LNSIFATWKI 60 QAPKEWNISG ELCSGAAIND VTIDDKDHNP LIKCGCTFVN STICRITALK VYARDVVGPI 120 PQELWTLIFL TNLNLAQNFL TGSLSPAIGN LTLMQWMTFG INALSGPVPK EIGRLTDLRS 180 LSIGSNNFSG SIPAEIGNCT KLQQIYIGSS GLNGEIPLSL ANLVELTVAW IMDLEVTGRI 240 PDFIGNWTKL TTLRIMGTGL SGPIPSSFSN LTSLSQLVLR NNNLTGTIPS NIGDYSSLLQ 300 VDLSFNKLHG PIPASLFNLS QLTHLFLGNN TLNGSLPTQK RQSLINIDVS YNDLSGSLPS 360 WISLPNLKLN LVANNFTLEG LDNSVLSGLN CLQKNFACNR GKGIYYNFSI NCGGPEIRSA 420 SGALYEKEDM DLGPASFVVS AAQRWAASSV GNFAGSSRNK YRETSQSQFI NTLDSELFQS 480 ARLSASSLRY YGLGLENGGY TVTLQFAEIQ IQGSNSWKGI GRRRFDIYVQ GRLVEKDFDI 540 RRTAGGSSVR AVQREYKTNV SENHLEVHLF WAGKGTCCIP IQGAYGPLIS AVSATPDFTP 600 TVANRPPSKE KNMTGTIVGV IVAVGLLSIL AGVVIFIILK SRKPYTDDEE ILSMDIKPYT 660 FTYSILKSAT QDFDPSNKLG EGAFGVVYKG TLNDGREIAV KKLSSVGSRH GKGQFVAEIV 720 AISSVLHRNL VKLYGCCFEG DQRLLVYEYL SNGSLDDALF VSGRKNSDEN LEEGKKYLLE 780 WAWNLHEKSR DVELIDDELG EYNMEEVKCM IGVALLCTQS SHALRPPMSR VVAMLSGDAE 840 VNDATSKPGH LIDSIYDDTT SSSYSGFQTK DTSFSTSFVT PGPRDSDSKP MLGFKIKEGR 900 * 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 1.0e-34 | 118 | 394 | 306 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-37 | 95 | 379 | 290 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 3.0e-38 | 124 | 377 | 268 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 4.0e-39 | 116 | 377 | 266 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 9.0e-56 | 406 | 592 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | C0LGH3 | 0 | 1 | 760 | 1 | 779 | Y5614_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g56140; Flags: Precursor |
RefSeq | NP_176008.4 | 0 | 26 | 760 | 1 | 796 | kinase [Arabidopsis thaliana] |
RefSeq | NP_176008.4 | 0 | 760 | 900 | 903 | 1047 | kinase [Arabidopsis thaliana] |
RefSeq | NP_176009.1 | 0 | 1 | 760 | 1 | 780 | leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] |
RefSeq | NP_176009.1 | 0 | 760 | 900 | 887 | 1032 | leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 6e-24 | 102 | 337 | 437 | 718 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 3rj0_A | 3e-21 | 154 | 360 | 342 | 553 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 3rj0_A | 1e-20 | 106 | 369 | 222 | 499 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 3rj0_A | 8e-20 | 102 | 320 | 335 | 559 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 3rj0_A | 7e-19 | 101 | 375 | 241 | 521 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |