y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb06g022450.1 |
Family | GH1 |
Protein Properties | Length: 516 Molecular Weight: 58642.4 Isoelectric Point: 8.2809 |
Chromosome | Chromosome/Scaffold: 6 Start: 51666961 End: 51674813 |
Description | beta glucosidase 46 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 26 | 497 | 0 |
RNQFPPDFLFGTSTSAYQIEGGYLEGNKGLSNWDIFTHKQGTVEDGTNGDTADDHYHRYMEDIELIHSLGVNSYRFSIAWARILPKGRFGHVNPDGVAFY NALIDALLQRGIEPFVTISHYDIPYELEKRYGGWLSPKIRRDFGYLADVCFRMFGDRVKFWITFNEPNIFAKLSYIYGRYPPGHCSRPFGNCTSGNSSTE PYIVGHNMVLSHANVVSIYKEKYQGKQGGYIGITVLSRWYEPFRNIPTDILAVDRGLSFGAPWFLDPIILGDYPSPMRKMLGPNLPEFTSKQKKILQPSK LDFIGLNHYSTSYLKDCIYSSPCELDPFDGDAQISTSIDRDGILIGERTGSPYLNVVPYGMEKVVMYFKRRYNNTPMYITENGYAQASNSNMSAKDFTND TGRVDYLQGYLTFLASAIRKGADVRGYFVWSLLDNFEWNSGYTQRFGLYHVDFKTQKRTPKLSAKWYSEFLK |
Full Sequence |
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Protein Sequence Length: 516 Download |
MAGVIIVLVF FLAHQLLPCA SSAIDRNQFP PDFLFGTSTS AYQIEGGYLE GNKGLSNWDI 60 FTHKQGTVED GTNGDTADDH YHRYMEDIEL IHSLGVNSYR FSIAWARILP KGRFGHVNPD 120 GVAFYNALID ALLQRGIEPF VTISHYDIPY ELEKRYGGWL SPKIRRDFGY LADVCFRMFG 180 DRVKFWITFN EPNIFAKLSY IYGRYPPGHC SRPFGNCTSG NSSTEPYIVG HNMVLSHANV 240 VSIYKEKYQG KQGGYIGITV LSRWYEPFRN IPTDILAVDR GLSFGAPWFL DPIILGDYPS 300 PMRKMLGPNL PEFTSKQKKI LQPSKLDFIG LNHYSTSYLK DCIYSSPCEL DPFDGDAQIS 360 TSIDRDGILI GERTGSPYLN VVPYGMEKVV MYFKRRYNNT PMYITENGYA QASNSNMSAK 420 DFTNDTGRVD YLQGYLTFLA SAIRKGADVR GYFVWSLLDN FEWNSGYTQR FGLYHVDFKT 480 QKRTPKLSAK WYSEFLKGSP LRTRPQNGNS YQYTA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 3.0e-139 | 26 | 494 | 487 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02849 | PLN02849 | 1.0e-140 | 5 | 500 | 499 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 1.0e-144 | 7 | 499 | 503 | + beta-glucosidase | ||
TIGR03356 | BGL | 4.0e-159 | 30 | 492 | 467 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-173 | 26 | 501 | 480 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ31330.1 | 0 | 43 | 504 | 130 | 553 | hypothetical protein OsJ_15447 [Oryza sativa Japonica Group] |
RefSeq | NP_001053302.1 | 0 | 1 | 504 | 1 | 503 | Os04g0513100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448169.1 | 0 | 7 | 498 | 4 | 493 | hypothetical protein SORBIDRAFT_06g022410 [Sorghum bicolor] |
RefSeq | XP_002448173.1 | 0 | 1 | 515 | 1 | 515 | hypothetical protein SORBIDRAFT_06g022450 [Sorghum bicolor] |
RefSeq | XP_002448174.1 | 0 | 1 | 511 | 1 | 513 | hypothetical protein SORBIDRAFT_06g022460 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 24 | 497 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 24 | 497 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgl_B | 0 | 24 | 497 | 15 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 24 | 497 | 15 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 24 | 497 | 15 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |