y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00059033m |
Family | GH1 |
Protein Properties | Length: 350 Molecular Weight: 40039.4 Isoelectric Point: 6.347 |
Chromosome | Chromosome/Scaffold: 0194475 Start: 506 End: 2311 |
Description | beta glucosidase 46 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 4 | 349 | 0 |
GGVNPAGIKFYNNLINSLLRKGIQPFVTINHFDVPRELEERYGSWLSPEMQEDFIYFANLCFKMFGDRVKHWTTFNEPNLMVKLGYFSGKFPPNHCSKPF GKCTSGNSSTEPYIAAHGIILAHAKTVNIYRKNYQAKQGGSVGITIFMIWYEPLRNITEDHIAVSRAQSFEAPWFLDPLFFGDYPHDMHQILGSNLPKFT EGEKQLLKNQIDFVGINHYNTLYVKDCIFSPCDLDTYTGDALVSESAERNGISIGKPTPVENSFVVPSSMEKLVMYLNQRYQNIPLYITENGYAQIGNSS STVEELFNDTERLSYIRDYLTYLSFAIRKGANVYFVLSLMDNFEWL |
Full Sequence |
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Protein Sequence Length: 350 Download |
GHFGGVNPAG IKFYNNLINS LLRKGIQPFV TINHFDVPRE LEERYGSWLS PEMQEDFIYF 60 ANLCFKMFGD RVKHWTTFNE PNLMVKLGYF SGKFPPNHCS KPFGKCTSGN SSTEPYIAAH 120 GIILAHAKTV NIYRKNYQAK QGGSVGITIF MIWYEPLRNI TEDHIAVSRA QSFEAPWFLD 180 PLFFGDYPHD MHQILGSNLP KFTEGEKQLL KNQIDFVGIN HYNTLYVKDC IFSPCDLDTY 240 TGDALVSESA ERNGISIGKP TPVENSFVVP SSMEKLVMYL NQRYQNIPLY ITENGYAQIG 300 NSSSTVEELF NDTERLSYIR DYLTYLSFAI RKGANVYFVL SLMDNFEWLS 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03356 | BGL | 1.0e-83 | 3 | 348 | 349 | + beta-galactosidase. | ||
PLN02814 | PLN02814 | 7.0e-85 | 4 | 350 | 354 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 2.0e-87 | 4 | 349 | 353 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 2.0e-87 | 4 | 347 | 349 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 3.0e-99 | 3 | 350 | 358 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ31331.1 | 0 | 1 | 349 | 73 | 421 | hypothetical protein OsJ_15448 [Oryza sativa Japonica Group] |
Swiss-Prot | Q7XSK2 | 0 | 1 | 349 | 117 | 466 | BGL16_ORYSJ RecName: Full=Beta-glucosidase 16; Short=Os4bglu16; Flags: Precursor |
RefSeq | XP_002448166.1 | 0 | 25 | 350 | 2 | 328 | hypothetical protein SORBIDRAFT_06g022385 [Sorghum bicolor] |
RefSeq | XP_002448169.1 | 0 | 1 | 350 | 109 | 460 | hypothetical protein SORBIDRAFT_06g022410 [Sorghum bicolor] |
RefSeq | XP_002448170.1 | 0 | 1 | 350 | 416 | 767 | hypothetical protein SORBIDRAFT_06g022420 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 4 | 350 | 105 | 448 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
PDB | 2rgm_A | 0 | 4 | 350 | 105 | 448 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
PDB | 2rgl_B | 0 | 4 | 350 | 105 | 448 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 4 | 350 | 105 | 448 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 4 | 350 | 105 | 448 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN143487 | 256 | 86 | 339 | 0 |
AW671741 | 218 | 27 | 244 | 0 |
HO320743 | 175 | 178 | 350 | 0 |
HO320743 | 84 | 86 | 169 | 0 |
HO285562 | 175 | 178 | 350 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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