| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g029620.1 |
| Family | GH1 |
| Protein Properties | Length: 453 Molecular Weight: 51242.6 Isoelectric Point: 6.9309 |
| Chromosome | Chromosome/Scaffold: 2 Start: 64714156 End: 64718422 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 70 | 438 | 0 |
| DGRGAVNPKGLEYYNNLIDELLSYGIQPHVTIYHFDFPQALQDEYNGLISRKFIEDFTAYADVCFKNFGNRVKYWTTVNEPNIETVGGYDEGILPPRRCS SPFGFPCNGGNSTTEPYIAAHHLLLAHASAVSLYREKYQFEPATQTPDDAAAAERMKEFHIGWFMHPIVYGDYPPVMQKNVGPRLPSFTDEERKKVKGSF DFVGFNHYIVVHVRADLNRLKQKLRDYMGDAAVKFDSNQFPIRLNSLTIDFKTSKPWALKKLLRHIRVKYKNPPVMIHENGAADRPDPSGGNSYDDEFRS QFLQDYIEATLESIRDGSNVRGYFVWSFLDMFEFLFGYRLRFGLYGVDFSSSARTRYQRHSARWYSSFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 453 Download |
| MAAKTTHSYD AALLFLLAGV LAAAPAASIT RSDFPAGFVF GAGSSAYQVE GAFAEDGRNA 60 SIWDTFTHED GRGAVNPKGL EYYNNLIDEL LSYGIQPHVT IYHFDFPQAL QDEYNGLISR 120 KFIEDFTAYA DVCFKNFGNR VKYWTTVNEP NIETVGGYDE GILPPRRCSS PFGFPCNGGN 180 STTEPYIAAH HLLLAHASAV SLYREKYQFE PATQTPDDAA AAERMKEFHI GWFMHPIVYG 240 DYPPVMQKNV GPRLPSFTDE ERKKVKGSFD FVGFNHYIVV HVRADLNRLK QKLRDYMGDA 300 AVKFDSNQFP IRLNSLTIDF KTSKPWALKK LLRHIRVKYK NPPVMIHENG AADRPDPSGG 360 NSYDDEFRSQ FLQDYIEATL ESIRDGSNVR GYFVWSFLDM FEFLFGYRLR FGLYGVDFSS 420 SARTRYQRHS ARWYSSFLHG GELRPVALLD RA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 2.0e-87 | 35 | 434 | 463 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 6.0e-112 | 34 | 437 | 465 | + Glycosyl hydrolase family 1. | ||
| PLN02814 | PLN02814 | 2.0e-122 | 28 | 440 | 472 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 7.0e-134 | 30 | 440 | 470 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 4.0e-136 | 30 | 440 | 470 | + beta-glucosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR38197.1 | 0 | 29 | 452 | 43 | 530 | unknown [Zea mays] |
| Swiss-Prot | B7F7K7 | 0 | 29 | 445 | 30 | 510 | BGL31_ORYSJ RecName: Full=Beta-glucosidase 31; Short=Os9bglu31; Flags: Precursor |
| GenBank | EEC84871.1 | 0 | 29 | 445 | 30 | 510 | hypothetical protein OsI_32014 [Oryza sativa Indica Group] |
| RefSeq | NP_001063638.1 | 0 | 29 | 445 | 30 | 510 | Os09g0511600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002462652.1 | 0 | 1 | 452 | 1 | 452 | hypothetical protein SORBIDRAFT_02g029620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 20 | 438 | 3 | 486 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3gnp_A | 0 | 20 | 438 | 3 | 486 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 3gno_A | 0 | 20 | 438 | 3 | 486 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 29 | 438 | 15 | 479 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 29 | 438 | 15 | 479 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
