y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra006756 |
Family | GH1 |
Protein Properties | Length: 506 Molecular Weight: 56570.5 Isoelectric Point: 5.7153 |
Chromosome | Chromosome/Scaffold: 03 Start: 4922839 End: 4925477 |
Description | beta glucosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 28 | 480 | 0 |
RSDFPEDFAFGSGTSAYQWEGAATEDGRKPSIWDTFVNSRNLENGDIACDGYHKYKEDVQLMVETGLDAFKLSISWSRLIPNGRGPVNPKGLQFYKSFIQ ELVTHGIEPHVTLHHYDLPQALQDDYGGWLNRTIIEDFTAYADVCFREFGSHVKFWTTINEANIFTIGSYNDGITGPGRCSGNCMSGNSSTEPYIVGHNL LLAHASASRLYRQKYKDMHGGSVALSLYAIGFSPATSSKDDEMAAQRARDFYLGWMLEPLVYGDYPYVMRKTVGSRLPNFSEEESELVKGSSDFIGIIHY LAASVTNTKPNPTGYSDFYSDTGITLSYTCNITTSQCAVTPWALEGVLEYIKQSYGNPPVYILENGKSMKGDFQMQQKDTPRIEYLHVYIGAVLNAVRNG SDTRGYFIWSFMDVYELLGGYGPKYGLYYVNFSDTHLTRFPKLSAHWYSAFLK |
Full Sequence |
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Protein Sequence Length: 506 Download |
MMDWVLSLII TISLALPFTG RCSHVYTRSD FPEDFAFGSG TSAYQWEGAA TEDGRKPSIW 60 DTFVNSRNLE NGDIACDGYH KYKEDVQLMV ETGLDAFKLS ISWSRLIPNG RGPVNPKGLQ 120 FYKSFIQELV THGIEPHVTL HHYDLPQALQ DDYGGWLNRT IIEDFTAYAD VCFREFGSHV 180 KFWTTINEAN IFTIGSYNDG ITGPGRCSGN CMSGNSSTEP YIVGHNLLLA HASASRLYRQ 240 KYKDMHGGSV ALSLYAIGFS PATSSKDDEM AAQRARDFYL GWMLEPLVYG DYPYVMRKTV 300 GSRLPNFSEE ESELVKGSSD FIGIIHYLAA SVTNTKPNPT GYSDFYSDTG ITLSYTCNIT 360 TSQCAVTPWA LEGVLEYIKQ SYGNPPVYIL ENGKSMKGDF QMQQKDTPRI EYLHVYIGAV 420 LNAVRNGSDT RGYFIWSFMD VYELLGGYGP KYGLYYVNFS DTHLTRFPKL SAHWYSAFLK 480 GDTTFLGSQG IAQLQNNFSS SSLVM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03356 | BGL | 4.0e-126 | 32 | 475 | 449 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 8.0e-155 | 31 | 481 | 460 | + Glycosyl hydrolase family 1. | ||
PLN02849 | PLN02849 | 0 | 2 | 502 | 506 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 0 | 5 | 502 | 506 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 0 | 7 | 481 | 486 | + beta-glucosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD14488.1 | 0 | 2 | 501 | 1 | 527 | AAD14488 Similar to gi |
EMBL | CAA18113.1 | 0 | 2 | 495 | 1 | 459 | glucosidase like protein [Arabidopsis thaliana] |
RefSeq | NP_176217.2 | 0 | 2 | 501 | 1 | 511 | BGLU4 (BETA GLUCOSIDASE 4); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_193941.2 | 0 | 2 | 495 | 1 | 498 | BGLU3 (BETA GLUCOSIDASE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_973974.1 | 0 | 5 | 501 | 7 | 486 | BGLU1 (BETA GLUCOSIDASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 27 | 480 | 13 | 487 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3gnp_A | 0 | 27 | 480 | 13 | 487 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 3gno_A | 0 | 27 | 480 | 13 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 27 | 480 | 16 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 27 | 480 | 16 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |